RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C1QTNF3Q9BXJ4 246 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 POLDIP3Q9BY77 421 aaKnown RBP14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 NXF5Q9H1B4 397 aaKnown RBP14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 SLC24A3Q9HC58 644 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 MAT2BQ9NZL9 334 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 KLRF1Q9NZS2 232 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 TMEM216Q9P0N5 145 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 VPS29Q9UBQ0 182 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 KCNN3Q9UGI6 736 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 UTS2RQ9UKP6 389 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 DTX4Q9Y2E6 619 aa14.42□□□□□ -0.1
CHCHD3-204ENST00000457942 GNG14A0A1W2PPG7 69 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 FAM221AA4D161 298 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 GOLGA8RI6L899 631 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 MANBAO00462 879 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 PPM1BO75688 479 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ATP1B1P05026 303 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 HSD3B1P14060 373 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 HSD3B2P26439 372 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 GCKP35557 465 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 HSD17B3P37058 310 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 CASP3P42574 277 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 TRA2BP62995 288 aaKnown RBP14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 LTBQ06643 244 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 CSTF3Q12996 717 aaKnown RBP14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 LTB4RQ15722 352 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 PRICKLE4Q2TBC4 344 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF678Q5SXM1 525 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 RIPPLY2Q5TAB7 128 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ANGPTL8Q6UXH0 198 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 TRMT10CQ7L0Y3 403 aaKnown RBP14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 OR52R1Q8NGF1 315 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 METTL6Q8TCB7 284 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 OMA1Q96E52 524 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 LCORQ96JN0 433 aaPredicted RBP14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 GNRHR2Q96P88 292 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF382Q96SR6 550 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ANGPTL4Q9BY76 406 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 GIMAP4Q9NUV9 329 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 EHD3Q9NZN3 535 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 PRODH2Q9UF12 536 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 ST6GALNAC2Q9UJ37 374 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 CES1P1Q9UKY3 287 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 STK38LQ9Y2H1 464 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 C15orf41Q9Y2V0 281 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 PLLPQ9Y342 182 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 SLC6A5Q9Y345 797 aa14.41□□□□□ -0.1
CHCHD3-204ENST00000457942 CCDC151A5D8V7 595 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 HSPB2A8KAH6 182 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 RIPK2O43353 540 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 PCDH7O60245 1069 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 DLX3O60479 287 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 CDH16O75309 829 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 ULK1O75385 1050 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 IL3P08700 152 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 ATP5F1P24539 256 aaPredicted RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 UQCRC1P31930 480 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 CDK9P50750 372 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 MRPS35P82673 323 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 MAP4K2Q12851 820 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 HSPB2Q16082 182 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 TIFABQ6ZNK6 161 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 LIX1LQ8IVB5 337 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 SLC22A9Q8IVM8 553 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 PM20D2Q8IYS1 436 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 OR1J4Q8NGS1 313 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 CDC26Q8NHZ8 85 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 EXOSC8Q96B26 276 aaKnown RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 HSPBAP1Q96EW2 488 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 LRRC46Q96FV0 321 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 RMND5BQ96G75 393 aaPredicted RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 TMEM41AQ96HV5 264 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 OSBPL11Q9BXB4 747 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 DLL4Q9NR61 685 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 SENP1Q9P0U3 644 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 PSMC3IPQ9P2W1 217 aaPredicted RBP14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 TBK1Q9UHD2 729 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 MCM8Q9UJA3 840 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 ZNF225Q9UK10 706 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 PCDHGB3Q9Y5G1 929 aa14.4□□□□□ -0.1
CHCHD3-204ENST00000457942 DVL2O14641 736 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 ACOX3O15254 700 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 CBX7O95931 251 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 HPNP05981 417 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 ABCB1P08183 1280 aaPredicted RBP14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 CHN1P15882 459 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 PCSK2P16519 638 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 S1PR1P21453 382 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 BMP5P22003 454 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 GCAP28676 217 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 WNT3P56703 355 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 DUSP2Q05923 314 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 BTKQ06187 659 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 CRYZQ08257 329 aaKnown RBP14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 ACSM2AQ08AH3 577 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 LCP2Q13094 533 aa14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHCHD3-204ENST00000457942 ERCC6LQ2NKX8 1250 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms