RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 TMEM125Q96AQ2 219 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 HSPBAP1Q96EW2 488 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 MAGED4Q96JG8 741 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 LCORQ96JN0 433 aaPredicted RBP16.82■□□□□ 0.28
TRIM13-206ENST00000457662 MARK4Q96L34 752 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 RILPQ96NA2 401 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 SIGLEC12Q96PQ1 595 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 HPF1Q9NWY4 346 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 PCDHGB4Q9UN71 923 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 ERVK-11Q9UQG0 969 aa16.82■□□□□ 0.28
TRIM13-206ENST00000457662 BOD1L1Q8NFC6 3051 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 A0A0G2JND7 137 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 CFLARO15519 480 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 EMC8O43402 210 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 SUV39H1O43463 412 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 C1QL1O75973 258 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 NEURL1O76050 574 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 OR6B1O95007 311 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 NADKO95544 446 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 IL12AP29459 219 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 SOX3P41225 446 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 MRPL19P49406 292 aaKnown RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 CDK9P50750 372 aaKnown RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 WNT3P56703 355 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 STX1BP61266 288 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 FAM174BQ3ZCQ3 159 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 SPANXN4Q5MJ08 99 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 RPUSD3Q6P087 351 aaKnown RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 IL20RBQ6UXL0 311 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 DND1Q8IYX4 353 aaKnown RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 CYP4Z2PQ8N1L4 340 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 SGCZQ96LD1 299 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 VSTM2LQ96N03 204 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 ZNF317Q96PQ6 595 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 ITPAQ9BY32 194 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 NXF5Q9H1B4 397 aaKnown RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 NEUROD4Q9HD90 331 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 TRIM33Q9UPN9 1127 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 DTX4Q9Y2E6 619 aa16.81■□□□□ 0.28
TRIM13-206ENST00000457662 GPR55Q9Y2T6 319 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 NUP214P35658 2090 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-206ENST00000457662 CAPN14A8MX76 684 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ACOX3O15254 700 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ZNF354AO60765 605 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SCN2BO60939 215 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PSMG1O95456 288 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 C6orf47O95873 294 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 IL6P05231 212 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PHC1P78364 1004 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PRR5P85299 388 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 C19orf57Q0VDD7 668 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ZNF766Q5HY98 468 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 METTL21CQ5VZV1 264 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SLC25A25Q6KCM7 469 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ZNF227Q86WZ6 799 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 Q8NA96 180 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 NUP43Q8NFH3 380 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 C5orf34Q96MH7 638 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 FOLH1BQ9HBA9 442 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 FAM120CQ9NX05 1096 aaKnown RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 NPFFR2Q9Y5X5 522 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 FRG2CA6NGY1 282 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TTC36A6NLP5 189 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ERN1O75460 977 aaKnown RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SLC25A12O75746 678 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SORBS2O94875 1100 aaKnown RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PGRP06401 933 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SP1P08047 785 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 NAGAP17050 411 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 CCT3P49368 545 aaKnown RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PRKAG1P54619 331 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 HBA1P69905 142 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PSPHP78330 225 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 LRRC74AQ0VAA2 488 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 ZNF791Q3KP31 576 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TMEM64Q6YI46 380 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TMEM178AQ8NBL3 297 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SPACA9Q96E40 222 aaPredicted RBP16.8■□□□□ 0.28
TRIM13-206ENST00000457662 BTBD9Q96Q07 612 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 OR52E6Q96RD3 313 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TIMMDC1Q9NPL8 285 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TMEM45AQ9NWC5 275 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 PCDHGA10Q9Y5H3 936 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 SNX8Q9Y5X2 465 aa16.8■□□□□ 0.28
TRIM13-206ENST00000457662 TTLL8A6PVC2 850 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 TO15178 435 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 ABCB1P08183 1280 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-206ENST00000457662 FBXO45P0C2W1 286 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 CT45A8P0DMV1 189 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 CT45A9P0DMV2 189 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 TMED10P49755 219 aaKnown RBP16.79■□□□□ 0.28
TRIM13-206ENST00000457662 ATP4BP51164 291 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 POLR2JP52435 117 aaKnown RBP16.79■□□□□ 0.28
TRIM13-206ENST00000457662 DGKQP52824 942 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 ARFIP2P53365 341 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 ZNHIT3Q15649 155 aaPredicted RBP16.79■□□□□ 0.28
TRIM13-206ENST00000457662 MAPKAPK3Q16644 382 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 CT45A2Q5DJT8 189 aa16.79■□□□□ 0.28
TRIM13-206ENST00000457662 COLEC12Q5KU26 742 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms