RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CCR8P51685 355 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 CD83Q01151 205 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 Q5BKY6 102 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 SLC27A4Q6P1M0 643 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 METAP1DQ6UB28 335 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TCTE3Q8IZS6 198 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 GRPEL2Q8TAA5 225 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TEX47Q8TBZ9 253 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TFGQ92734 400 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 PPP1R3EQ9H7J1 279 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 NT5DC2Q9H857 520 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 WDR70Q9NW82 654 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TRDV1A0A1B0GX56 115 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 PRNPP04156 253 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 APEX1P27695 318 aaKnown RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 MAP2K3P46734 347 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 KHKP50053 298 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 TRA2BP62995 288 aaKnown RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 RPA4Q13156 261 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 PLET1Q6UQ28 207 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 OLIG3Q7RTU3 272 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 UBE3DQ7Z6J8 389 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 LIX1LQ8IVB5 337 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 UBE2J2Q8N2K1 259 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 ZNF485Q8NCK3 441 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 ANKK1Q8NFD2 765 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 GNPDA2Q8TDQ7 276 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 HHIPL1Q96JK4 782 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 AMDHD1Q96NU7 426 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 NRTNQ99748 197 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 BEX2Q9BXY8 128 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 DDX31Q9H8H2 851 aaKnown RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 ZCCHC3Q9NUD5 404 aaKnown RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 COMMD3Q9UBI1 195 aa16.67■□□□□ 0.26
PTPN6-204ENST00000456013 PCYT1BQ9Y5K3 369 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-204ENST00000456013 HEATR5BQ9P2D3 2071 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 KDM4EB2RXH2 506 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 FGF18O76093 207 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ADH1AP07327 375 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CHRM4P08173 479 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 SLC2A2P11168 524 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 SLC6A11P48066 632 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 MAN2A2P49641 1150 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 EPHA5P54756 1037 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CAV3P56539 151 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 TLE2Q04725 743 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CHRNEQ04844 493 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ANKRD33Q7Z3H0 272 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 C19orf18Q8NEA5 215 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ZFYVE19Q96K21 471 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PITHD1Q9GZP4 211 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 KLHL21Q9UJP4 597 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PCDHGB7Q9Y5F8 929 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 A0A087WUU8 490 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 H7BY64 318 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CASKO14936 926 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CASC3O15234 703 aaKnown RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PROM1O43490 865 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 LZTS3O60299 673 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 TRIM3O75382 744 aaPredicted RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 UBXN7O94888 489 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CXCL14O95715 111 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 FGBP02675 491 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 GAAP10253 952 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PRKCAP17252 672 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PTBP1P26599 531 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ST8SIA6P61647 398 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 GPR19Q15760 415 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ARHGAP15Q53QZ3 475 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 SNAP47Q5SQN1 464 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 TRIQKQ629K1 86 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 TIGD3Q6B0B8 471 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 TYW3Q6IPR3 259 aaKnown RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CNIH2Q6PI25 160 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 Q8N402 240 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 AMER3Q8N944 861 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 DUSP18Q8NEJ0 188 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ARRDC3Q96B67 414 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 OTUB2Q96DC9 234 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PRAP1Q96NZ9 151 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 SLC38A2Q96QD8 506 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CTPS2Q9NRF8 586 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 ACOXLQ9NUZ1 547 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 RBFOX1Q9NWB1 397 aaKnown RBP16.66■□□□□ 0.26
PTPN6-204ENST00000456013 GPR52Q9Y2T5 361 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 PRKAB1Q9Y478 270 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 MYO10Q9HD67 2058 aa16.66■□□□□ 0.26
PTPN6-204ENST00000456013 CISD3P0C7P0 127 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 DRD2P14416 443 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 ALAS2P22557 587 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 HSD17B2P37059 387 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 FUT5Q11128 374 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 MADCAM1Q13477 382 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 MZT2BQ6NZ67 158 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 OR8D4Q8NGM9 314 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 OR5K2Q8NHB8 316 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 SUN3Q8TAQ9 357 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 TRIM63Q969Q1 353 aa16.65■□□□□ 0.26
PTPN6-204ENST00000456013 COQ7Q99807 217 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms