RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CA5BP1Q8WTZ4 195 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 DAZLQ92904 295 aaKnown RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 BADQ92934 168 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 ULK4Q96C45 1275 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 SLC41A3Q96GZ6 507 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 LRIG1Q96JA1 1093 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 NSMCE3Q96MG7 304 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 CDADC1Q9BWV3 514 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 TSSK1BQ9BXA7 367 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 STRADBQ9C0K7 418 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 FCF1Q9Y324 198 aaKnown RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 OR51B4Q9Y5P0 310 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 NPIPA7E9PJI5 369 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 DFFAO00273 331 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 TOR1AO14656 332 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 ITGB1BP1O14713 200 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 UGT1A9O60656 530 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 SERPINB7O75635 380 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 SERPINE1P05121 402 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 NPIPA8P0DM63 369 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 NCK1P16333 377 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 GM2AP17900 193 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 UQCRC2P22695 453 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 KPNA2P52292 529 aaKnown RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 WNT3AP56704 352 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 RPS15P62841 145 aaKnown RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 GNA12Q03113 381 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 AMZ1Q400G9 498 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 ATG9BQ674R7 924 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 Q6ZNX1 250 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 CDHR3Q6ZTQ4 885 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 PRSS42Q7Z5A4 293 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 FAM90A1Q86YD7 464 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 CTAGE3PQ8IX95 158 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 ZNF557Q8N988 423 aaPredicted RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 PTPMT1Q8WUK0 201 aaPredicted RBP7.34□□□□□ -1.23
BRCC3-208ENST00000453705 PIGQQ9BRB3 760 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 ADI1Q9BV57 179 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 DNTTIP1Q9H147 329 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 UGT1A7Q9HAW7 530 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 UGT1A10Q9HAW8 530 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 UGT1A8Q9HAW9 530 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 SCUBE2Q9NQ36 999 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 INSL5Q9Y5Q6 135 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 PLXNA2O75051 1894 aa7.34□□□□□ -1.23
BRCC3-208ENST00000453705 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 C5orf67F2Z3F1 127 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 ZMPSTE24O75844 475 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 OR4E1P0C645 316 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 FGF3P11487 239 aaPredicted RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 IL7RP16871 459 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PSMB6P28072 239 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 SLC6A4P31645 630 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 CD79BP40259 229 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PRPS1P60891 318 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PPP2R2BQ00005 443 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 CSHL1Q14406 222 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PTPRRQ15256 657 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 CERCAMQ5T4B2 595 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 RAET1LQ5VY80 246 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 HIST2H2BCQ6DN03 193 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 HIST2H2BDQ6DRA6 164 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 RGS7BPQ6MZT1 257 aaPredicted RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 MRNIPQ6NTE8 343 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 TSSK4Q6SA08 328 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PRSS55Q6UWB4 352 aaPredicted RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 CROCCP3Q8IVE0 287 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 PGBD5Q8N414 524 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 FITM2Q8N6M3 262 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 FNDC8Q8TC99 324 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 HAVCR1Q96D42 359 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 CELF6Q96J87 481 aaKnown RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 LMLNQ96KR4 655 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 SEPT5Q99719 369 aaPredicted RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 FICDQ9BVA6 458 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 DERL2Q9GZP9 239 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 ALKBH4Q9NXW9 302 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 BTBD3Q9Y2F9 522 aa7.34□□□□□ -1.24
BRCC3-208ENST00000453705 FAM32AQ9Y421 112 aaKnown RBP7.34□□□□□ -1.24
BRCC3-208ENST00000453705 COL6A3P12111 3177 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 MATN2O00339 956 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 TERTO14746 1132 aaKnown RBP7.33□□□□□ -1.24
BRCC3-208ENST00000453705 GSTA4O15217 222 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 CTPS1P17812 591 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SLC6A2P23975 617 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 NMBRP28336 390 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PNLIPRP2P54317 469 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 CSNK2A1P68400 391 aaPredicted RBP7.33□□□□□ -1.24
BRCC3-208ENST00000453705 REEP5Q00765 189 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 MGAT2Q10469 447 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 TMEM41BQ5BJD5 291 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 OTOP2Q7RTS6 562 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 FOXRED2Q8IWF2 684 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 TMEM151AQ8N4L1 468 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 Q8NA96 180 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 CSNK2A3Q8NEV1 391 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms