RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DDX5P17844 614 aaKnown RBP18.41■□□□□ 0.54
COL9A3-202ENST00000452372 GPX3P22352 226 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 HPCAL1P37235 193 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 EMDP50402 254 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 NR0B1P51843 470 aaKnown RBP18.41■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF385BQ569K4 471 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 LYPD8Q6UX82 237 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 BCORP1Q8N888 145 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 OR7G2Q8NG99 324 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 DNAJB8Q8NHS0 232 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 PIWIL2Q8TC59 973 aaKnown RBP18.41■□□□□ 0.54
COL9A3-202ENST00000452372 LRRC8CQ8TDW0 803 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 DYDC1Q8WWB3 177 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 SGCZQ96LD1 299 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 TIMMDC1Q9NPL8 285 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 MARCOQ9UEW3 520 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-202ENST00000452372 PRODH2Q9UF12 536 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 DTX4Q9Y2E6 619 aa18.41■□□□□ 0.54
COL9A3-202ENST00000452372 A0A087WV62 115 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 A1L4Q6 167 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 SDHDO14521 159 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 SCAMP2O15127 329 aaKnown RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 CLDN1O95832 211 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 IFI6P09912 130 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 LBPP18428 481 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 PRPS1L1P21108 318 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 FRKP42685 505 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 CLDN8P56748 225 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 C21orf58P58505 322 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF791Q3KP31 576 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ZNF324BQ6AW86 544 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 RTL4Q6ZR62 310 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 RIMKLAQ8IXN7 391 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 DND1Q8IYX4 353 aaKnown RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 GOLM1Q8NBJ4 401 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 PSD4Q8NDX1 1056 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 CIDECQ96AQ7 238 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ZBED6CLQ96FA7 236 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 C7orf26Q96N11 449 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ANKRA2Q9H9E1 313 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ACSS1Q9NUB1 689 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 KLF13Q9Y2Y9 288 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-202ENST00000452372 EML6Q6ZMW3 1958 aa18.4■□□□□ 0.54
COL9A3-202ENST00000452372 ASPDHA6ND91 283 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 CRYABP02511 175 aaKnown RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 FBXO45P0C2W1 286 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 PPICP45877 212 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 DIO3P55073 304 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 DCAF7P61962 342 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 OGFOD2Q6N063 350 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 KRTCAP2Q8N6L1 136 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 FAM98AQ8NCA5 519 aaKnown RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 OR7A2PQ8NGA2 310 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 COQ8BQ96D53 544 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 SPACA9Q96E40 222 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 ELP4Q96EB1 424 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 LCORQ96JN0 433 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 PRPF18Q99633 342 aaKnown RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 ITPAQ9BY32 194 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 NXF5Q9H1B4 397 aaKnown RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 C19orf53Q9UNZ5 99 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-202ENST00000452372 MAPRE3Q9UPY8 281 aa18.39■□□□□ 0.53
COL9A3-202ENST00000452372 KLRC4-KLRK1H3BQV0 150 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 ZNF195O14628 629 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 LAMP1P11279 417 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 DRD5P21918 477 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 COL8A1P27658 744 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 MC3RP41968 323 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 MANFP55145 182 aaKnown RBP18.38■□□□□ 0.53
COL9A3-202ENST00000452372 NRG3P56975 720 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 PMP22Q01453 160 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 CPTPQ5TA50 214 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 TMEM107Q6UX40 140 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 ZNF551Q7Z340 670 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-202ENST00000452372 SULF2Q8IWU5 870 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 OR2L13Q8N349 312 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 NATD1Q8N6N6 113 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 ST6GALNAC3Q8NDV1 305 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 ZFP28Q8NHY6 868 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 CKAP2Q8WWK9 683 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 HSPBAP1Q96EW2 488 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 FRMD6Q96NE9 622 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 SLX1AQ9BQ83 275 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 WDR55Q9H6Y2 383 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-202ENST00000452372 OLAHQ9NV23 265 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 ATAD3AQ9NVI7 634 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 TAS2R9Q9NYW1 312 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 GPR55Q9Y2T6 319 aaPredicted RBP18.38■□□□□ 0.53
COL9A3-202ENST00000452372 NPFFR2Q9Y5X5 522 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 MYO7BQ6PIF6 2116 aa18.38■□□□□ 0.53
COL9A3-202ENST00000452372 NUP214P35658 2090 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-202ENST00000452372 CREBBPQ92793 2442 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 CAPN14A8MX76 684 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 UPK1AO00322 258 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 ACOX3O15254 700 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 PEX1O43933 1283 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 EPHA3P29320 983 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 HSPB3Q12988 150 aa18.37■□□□□ 0.53
COL9A3-202ENST00000452372 MLC1Q15049 377 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms