RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 MBD3L4A6NDZ8 208 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 MBD3L3A6NE82 208 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 MBD3L5A6NJ08 208 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 B4DXG7 233 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 H0Y3Z8 333 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 H0YIV9 168 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PPP6CO00743 305 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 UGT2B11O75310 529 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 HRGP04196 525 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 ABCB1P08183 1280 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 TMIGD3P0DMS9 266 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 CPMP14384 443 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 CTSSP25774 331 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 CRABP2P29373 138 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 SERPINB1P30740 379 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 TIMP3P35625 211 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PAFAH1B1P43034 410 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 MRPS35P82673 323 aaKnown RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PCDH1Q08174 1060 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 MGAT2Q10469 447 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 FUT7Q11130 342 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 DAZAP2Q15038 168 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 LIPJQ5W064 366 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 TIGD3Q6B0B8 471 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 OR5M10Q6IEU7 315 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 CIARTQ8N365 385 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 C17orf53Q8N3J3 647 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 MBD3L2Q8NHZ7 208 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 HGDQ93099 445 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 INTS12Q96CB8 462 aaKnown RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 OMA1Q96E52 524 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PHF21BQ96EK2 531 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 GPR78Q96P69 363 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PIGQQ9BRB3 760 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PELOQ9BRX2 385 aaKnown RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 YIPF4Q9BSR8 244 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 G6PC3Q9BUM1 346 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 RBM24Q9BX46 236 aaKnown RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 WDR41Q9HAD4 459 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 C6orf203Q9P0P8 240 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 ZNF629Q9UEG4 869 aaPredicted RBP9.24□□□□□ -0.93
LINC01004-202ENST00000450686 ACOT9Q9Y305 439 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PLLPQ9Y342 182 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
LINC01004-202ENST00000450686 PRR14LQ5THK1 2151 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 A0A096LPK6 155 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ANKRD33BA6NCL7 494 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CD8B2A6NJW9 211 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 EIF3HO15372 352 aaKnown RBP eCLIP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 LILRA1O75019 489 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ERAL1O75616 437 aaKnown RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 PPM1BO75688 479 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CBX7O95931 251 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ALDOAP04075 364 aaKnown RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 PCSK2P16519 638 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 KRT15P19012 456 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CD53P19397 219 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CPOXP36551 454 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CPA2P48052 419 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ALDH18A1P54886 795 aaKnown RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 NRG3P56975 720 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 DCAF7P61962 342 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 PHEXP78562 749 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 TRAF3Q13114 568 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CBLBQ13191 982 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 CUL3Q13618 768 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 PCBP2Q15366 365 aaKnown RBP eCLIP9.23□□□□□ -0.936e-10■□□□□ 10.6
LINC01004-202ENST00000450686 TRMT12Q53H54 448 aaKnown RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 TCHHL1Q5QJ38 904 aaPredicted RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 TBCELQ5QJ74 424 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 DND1Q8IYX4 353 aaKnown RBP9.23□□□□□ -0.93
LINC01004-202ENST00000450686 WDSUB1Q8N9V3 476 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 SPATA4Q8NEY3 305 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 OR4K14Q8NGD5 310 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 OR1J4Q8NGS1 313 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 OR14L1PQ8NHC6 308 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ATP6V1E2Q96A05 226 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 NTNG2Q96CW9 530 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 TMEM41AQ96HV5 264 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 OSBPL11Q9BXB4 747 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 VPS11Q9H270 941 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ZBTB26Q9HCK0 441 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 MAT2BQ9NZL9 334 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 KLRF1Q9NZS2 232 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 JKAMPQ9P055 326 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 ADGRE2Q9UHX3 823 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 FBXL2Q9UKC9 423 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 PCDHGB3Q9Y5G1 929 aa9.23□□□□□ -0.93
LINC01004-202ENST00000450686 SONP18583 2426 aaKnown RBP9.22□□□□□ -0.93
LINC01004-202ENST00000450686 A0A087X1B8 175 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 SH3D21A4FU49 640 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 PRAMEF25A6NGN4 478 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 SYCE1LA8MT33 242 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 CAPN14A8MX76 684 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 H0YC42 278 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 SMAD7O15105 426 aaKnown RBP9.22□□□□□ -0.93
LINC01004-202ENST00000450686 ICOSLGO75144 302 aa9.22□□□□□ -0.93
LINC01004-202ENST00000450686 SNX4O95219 450 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms