RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TRBV5-3A0A0A0MS03 114 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 IRGMA1A4Y4 181 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 E9PQ18 207 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 SMAD3P84022 425 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 TXNDC8Q6A555 127 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 VTCN1Q7Z7D3 282 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 HGDQ93099 445 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 ARL5BQ96KC2 179 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 APOLD1Q96LR9 279 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 ABCG4Q9H172 646 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 SELENOFO60613 162 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF821O75541 412 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 RGS11O94810 467 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 KDM4BO94953 1096 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 URODP06132 367 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ADRB1P08588 477 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 HLA-FP30511 346 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SMIM11AP58511 58 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 IRF8Q02556 426 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 FRG2Q64ET8 278 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC27A4Q6P1M0 643 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 TRIM40Q6P9F5 258 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 KRTCAP2Q8N6L1 136 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ARL14EPQ8N8R7 260 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 AP3S1Q92572 193 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 FRG2BQ96QU4 278 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 DOHHQ9BU89 302 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 NDRG3Q9UGV2 375 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 RPH3AQ9Y2J0 694 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 UGDHO60701 494 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 TBL1XO60907 577 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SYPP08247 313 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 FGF2P09038 288 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF806P0C7X5 589 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 RHCEP18577 417 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 CDKN1CP49918 316 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 DCDC1P59894 354 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 FGL2Q14314 439 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 CPTPQ5TA50 214 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 PLAG1Q6DJT9 500 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SCRN2Q96FV2 425 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SFXN2Q96NB2 322 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 PRR14Q9BWN1 585 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SDHAF3Q9NRP4 125 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 PCDHB11Q9Y5F2 797 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR6C65A6NJZ3 312 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 TGM5O43548 720 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 GPX2P18283 190 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 EPHB3P54753 998 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC7A9P82251 487 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 CD276Q5ZPR3 534 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ANGPTL8Q6UXH0 198 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 UBE2R2Q712K3 238 aaPredicted RBP12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 CXorf40BQ96DE9 158 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 COPS8Q99627 209 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 ANGPT4Q9Y264 503 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 KCNK7Q9Y2U2 307 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 NOTCH4Q99466 2003 aa12.75□□□□□ -0.37
SYNGAP1-204ENST00000449372 AIPO00170 330 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 PRRG1O14668 218 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 PRAMEF12O95522 483 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 NMBP08949 121 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 GSTM5P46439 218 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 SPIBQ01892 262 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 OPCMLQ14982 345 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CDKN3Q16667 212 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 C22orf42Q6IC83 251 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 LRRC46Q96FV0 321 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 MRPL17Q9NRX2 175 aaKnown RBP12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 PLXNB3Q9ULL4 1909 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 NPIPB8E9PQR5 432 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 IGSF6O95976 241 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 MPC1LP0DKB6 136 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 CTSAP10619 480 aa12.74□□□□□ -0.37
SYNGAP1-204ENST00000449372 RAB3BP20337 219 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms