RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 PUDPQ08623 228 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 CNTN1Q12860 1018 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 CAMKMTQ7Z624 323 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 OXR1Q8N573 874 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 KIAA1958Q8N8K9 716 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 TAC3Q9UHF0 121 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
SEMA3F-206ENST00000434342 FEZF1A0PJY2 475 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 WASHC1A8K0Z3 465 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 FABP7O15540 132 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 C1QBP02746 253 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 IRS1P35568 1242 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 NUP62P37198 522 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SLC6A11P48066 632 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 VEGFBP49765 207 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 C21orf58P58505 322 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MXD1Q05195 221 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 COL9A2Q14055 689 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ZNF77Q15935 545 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TOR1AIP1Q5JTV8 583 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PRAMEF14Q5SWL7 426 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PRAMEF13Q5VWM6 474 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PTCHD4Q6ZW05 846 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SFTPA1Q8IWL2 248 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 GEMIN6Q8WXD5 167 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 EXOSC8Q96B26 276 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 OTUB1Q96FW1 271 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 DCLRE1CQ96SD1 692 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CXorf36Q9H7Y0 433 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 C11orf16Q9NQ32 467 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ACER3Q9NUN7 267 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ZNF226Q9NYT6 803 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MGAT4AQ9UM21 535 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MGAT4BQ9UQ53 548 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ANGPT4Q9Y264 503 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MRPS23Q9Y3D9 190 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PCDHGA2Q9Y5H1 932 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PCYT1BQ9Y5K3 369 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PRRT4C9JH25 899 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TPST2O60704 377 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MRPS14O60783 128 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CCNB2O95067 398 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 GASTP01350 101 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CDK1P06493 297 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SELLP14151 372 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PTGER1P34995 402 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CTNNB1P35222 781 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 KIR2DL3P43628 341 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CSNK2BP67870 215 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 FAM71E1Q6IPT2 247 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 FAM83HQ6ZRV2 1179 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 RASSF6Q6ZTQ3 369 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 LAX1Q8IWV1 398 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 B3GNT7Q8NFL0 401 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ZNF431Q8TF32 576 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ZFPM2Q8WW38 1151 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ASB15Q8WXK1 588 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SLC9A6Q92581 669 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TRIM43Q96BQ3 446 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MTERF3Q96E29 417 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 H3BN98 237 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SOD1P00441 154 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 IFNW1P05000 195 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ADH5P11766 374 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TRIM23P36406 574 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 GBX2P52951 348 aaPredicted RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ALKBH2Q6NS38 261 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 DEF8Q6ZN54 512 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SPRED2Q7Z698 418 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 MRPL43Q8N983 215 aaKnown RBP11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 ARRDC3Q96B67 414 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 DYRK4Q9NR20 520 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TM7SF3Q9NS93 570 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 TAS2R7Q9NYW3 318 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 SCN8AQ9UQD0 1980 aa11.56□□□□□ -0.56
SEMA3F-206ENST00000434342 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 H7BY64 318 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 IGFBP1P08833 259 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 CHRM5P08912 532 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 ACADMP11310 421 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 CEBPBP17676 345 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 BTF3P20290 206 aaKnown RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 PSMB5P28074 263 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 CNR2P34972 360 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 CDC42P60953 191 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 RAB14P61106 215 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 ZNF630Q2M218 657 aaPredicted RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 FAM131AQ6UXB0 335 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 TRILQ7L0X0 811 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 VWA5B2Q8N398 1253 aa11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 PAWRQ96IZ0 340 aaKnown RBP11.55□□□□□ -0.56
SEMA3F-206ENST00000434342 PRAP1Q96NZ9 151 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms