RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 CCNYL2Q5T2Q4 361 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 MROH9Q5TGP6 573 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 FRG2Q64ET8 278 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 ADGRE4PQ86SQ3 457 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 CCDC25Q86WR0 208 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 OR14L1PQ8NHC6 308 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 WNT2BQ93097 391 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 HGDQ93099 445 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 ATP6V1E2Q96A05 226 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 OMA1Q96E52 524 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 LCORQ96JN0 433 aaPredicted RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 FRG2BQ96QU4 278 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 TUBA1CQ9BQE3 449 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 OR2B2Q9GZK3 357 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 NOL11Q9H8H0 719 aaKnown RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 KLRF1Q9NZS2 232 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 DTX4Q9Y2E6 619 aa13.55□□□□□ -0.24
PRKDC-203ENST00000432581 UTP11Q9Y3A2 253 aaKnown RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 NSD1Q96L73 2696 aaPredicted RBP13.55□□□□□ -0.24
PRKDC-203ENST00000432581 MPDZO75970 2070 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 C1orf226A1L170 272 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 CASKO14936 926 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 CHMP24386 653 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SOX18P35713 384 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SLCO1A2P46721 670 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 CCNG1P51959 295 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 MAPK12P53778 367 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 DIO3P55073 304 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 NKX6-1P78426 367 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 FOXF2Q12947 444 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 IFT88Q13099 833 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 NNATQ16517 81 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 PRICKLE4Q2TBC4 344 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 TTC19Q6DKK2 380 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SLC48A1Q6P1K1 146 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 LUZP2Q86TE4 346 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 NODALQ96S42 347 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 NTMT1Q9BV86 223 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 ITPAQ9BY32 194 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 MRPL1Q9BYD6 325 aaKnown RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 BRINP2Q9C0B6 783 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 GALNT9Q9HCQ5 603 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 SERHLQ9NQF3 203 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 NDRG3Q9UGV2 375 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 BCAP29Q9UHQ4 241 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 EIF3LQ9Y262 564 aaKnown RBP13.54□□□□□ -0.24
PRKDC-203ENST00000432581 PCDHA9Q9Y5H5 950 aa13.54□□□□□ -0.24
PRKDC-203ENST00000432581 A0A096LPK6 155 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 OR7A17O14581 309 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 ARHGEF9O43307 516 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
PRKDC-203ENST00000432581 PTGDSP41222 190 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 SRYQ05066 204 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 MGAT2Q10469 447 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 POU4F3Q15319 338 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 AAGABQ6PD74 315 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 CLEC9AQ6UXN8 241 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 IFNEQ86WN2 208 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 KRTAP1-3Q8IUG1 177 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 TRIM42Q8IWZ5 723 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 METTL4Q8N3J2 472 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 FBXO25Q8TCJ0 367 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 INTS12Q96CB8 462 aaKnown RBP13.53□□□□□ -0.24
PRKDC-203ENST00000432581 GPR78Q96P69 363 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 SMR3AQ99954 134 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 TAS2R10Q9NYW0 307 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 MAT2BQ9NZL9 334 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 PRODH2Q9UF12 536 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 ZNF639Q9UID6 485 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 CES1P1Q9UKY3 287 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 TMCO1Q9UM00 188 aa13.53□□□□□ -0.24
PRKDC-203ENST00000432581 HMX2A2RU54 273 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 A8MXE2 369 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 TO15178 435 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 ABCB7O75027 752 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 UGT2B11O75310 529 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 ERAL1O75616 437 aaKnown RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 DRD5P21918 477 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 CNTFP26441 200 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 TYK2P29597 1187 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 SRD5A2P31213 254 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 FEN1P39748 380 aaKnown RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 PPICP45877 212 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 SERPINB8P50452 374 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms