RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ANK2Q01484 3957 aa9.25□□□□□ -0.93
TNFAIP3-202ENST00000420009 SONP18583 2426 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 GOLGA6L10A0A0M3HER8 536 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 K7EPI3 171 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 PHGDHO43175 533 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ICOSLGO75144 302 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SOX30O94993 753 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 TGM6O95932 706 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 CRHP06850 196 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 FAM58BPP0C7Q3 252 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ZNF708P17019 499 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 BSGP35613 385 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 UGT2B10P36537 528 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SLC12A2P55011 1212 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 CLDN18P56856 261 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SRYQ05066 204 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ILF2Q12905 390 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SNTA1Q13424 505 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 FASTKD3Q14CZ7 662 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ZKSCAN8Q15776 578 aaPredicted RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SLC30A6Q6NXT4 461 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 VWA1Q6PCB0 445 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 IFNEQ86WN2 208 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 PHC2Q8IXK0 858 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 WDSUB1Q8N9V3 476 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 OR7G1Q8NGA0 311 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 OR14L1PQ8NHC6 308 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 STARD4Q96DR4 205 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 UBXN10Q96LJ8 280 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 NODALQ96S42 347 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 MTERF1Q99551 399 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 WDR41Q9HAD4 459 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 SMYD2Q9NRG4 433 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 NSMCE4AQ9NXX6 385 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 RNF112Q9ULX5 631 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 MAPRE3Q9UPY8 281 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 EXO1Q9UQ84 846 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 JRKLQ9Y4A0 524 aa9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
TNFAIP3-202ENST00000420009 MED12LQ86YW9 2145 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 PRAMEF25A6NGN4 478 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 LRRC14BA6NHZ5 514 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 PGRMC2O15173 223 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 TP73O15350 636 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 UGT2B11O75310 529 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 CBR3O75828 277 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 AVPP01185 164 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 KRT15P19012 456 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 S1PR1P21453 382 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 CNTFP26441 200 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 STARP49675 285 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 DMTNQ08495 405 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 CUL3Q13618 768 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 NNATQ16517 81 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 KBTBD12Q3ZCT8 623 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 HEPHL1Q6MZM0 1159 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 AAGABQ6PD74 315 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 NUP54Q7Z3B4 507 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 MEIOBQ8N635 442 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 EXT2Q93063 718 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 CAVIN3Q969G5 261 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 OMA1Q96E52 524 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 TSPAN17Q96FV3 270 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 GPR22Q99680 433 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 ELOVL5Q9NYP7 299 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 TAS2R10Q9NYW0 307 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 NUDT4Q9NZJ9 180 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 OPTCQ9UBM4 332 aa9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 MTO1Q9Y2Z2 717 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-202ENST00000420009 DSCAMO60469 2012 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 RNF212BA8MTL3 300 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 GOLGA6L6A8MZA4 724 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 E7ESA3 106 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 H0YIV9 168 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 C16orf97H3BN30 126 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 ACOX3O15254 700 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 WIPF1O43516 503 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 TMCC2O75069 709 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 PIAS1O75925 651 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 CGAP01215 116 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 NID1P14543 1247 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 STMN1P16949 149 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 PTX3P26022 381 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 PIK3R1P27986 724 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 SRD5A2P31213 254 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 KIR2DL2P43627 348 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 ARL4CP56559 192 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 PLCXD2Q0VAA5 305 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 TNK1Q13470 666 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 BCL2A1Q16548 175 aa9.22□□□□□ -0.93
TNFAIP3-202ENST00000420009 OR2A2Q6IF42 318 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms