RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZAR1LA6NP61 321 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CLCA1A8K7I4 914 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CHURC1-FNTBB4DL54 471 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FFAR1O14842 300 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC22A1O15245 554 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 UGT2B17O75795 530 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 INMTO95050 263 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GABARAPO95166 117 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 LGI1O95970 557 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OSMP13725 252 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GABRB1P18505 474 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 POLR2CP19387 275 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FEN1P39748 380 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 MAPK10P53779 464 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 PRKAG1P54619 331 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ALDH6A1Q02252 535 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 PIGFQ07326 219 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ILKQ13418 452 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DGCR6Q14129 220 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 LASP1Q14847 261 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TBCEQ15813 527 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ST3GAL2Q16842 350 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CYP27C1Q4G0S4 372 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FGD3Q5JSP0 725 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 KLHL17Q6TDP4 642 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TMEM107Q6UX40 140 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DEF8Q6ZN54 512 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 LINC00299Q6ZSB3 139 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 RNF44Q7L0R7 432 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SYT13Q7L8C5 426 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DNAJC22Q8N4W6 341 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR4K14Q8NGD5 310 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR5D16Q8NGK9 328 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 C9orf43Q8TAL5 461 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 BAHD1Q8TBE0 780 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 PRRC1Q96M27 445 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 MS4A4EQ96PG1 132 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TRNT1Q96Q11 434 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR7D2Q96RA2 312 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 COPS4Q9BT78 406 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 UCK2Q9BZX2 261 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 C6orf106Q9H6K1 298 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SYNPO2LQ9H987 977 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ACOT13Q9NPJ3 140 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 NECTIN3Q9NQS3 549 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GIN1Q9NXP7 522 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 PTGFRNQ9P2B2 879 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DAPP1Q9UN19 280 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CCDC88CQ9P219 2028 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TRBV23OR9-2A0A075B6M9 112 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 A0A0J9YVX5 310 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TRBV4-1A0A0J9YWV2 114 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SHISA7A6NL88 538 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GASTP01350 101 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ALPPP05187 535 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CDK1P06493 297 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CHRM4P08173 479 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 C8orf89P0DMQ9 161 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SRFP11831 508 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ALOX12P18054 663 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CD6P30203 668 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 IFNA8P32881 189 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 MC3RP41968 323 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CTSKP43235 329 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 IDH2P48735 452 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 MASP1P48740 699 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 MAN2A2P49641 1150 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 HPCAP84074 193 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 DUSP2Q05923 314 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FUT5Q11128 374 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 COX10Q12887 443 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 EIF2B5Q13144 721 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 PTGES3Q15185 160 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GPAT3Q53EU6 434 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FRMPD2BQ6IN97 320 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CDC73Q6P1J9 531 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CD300LDQ6UXZ3 194 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC16A12Q6ZSM3 486 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 USP53Q70EK8 1073 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 AHSA2Q719I0 299 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TRIM73Q86UV7 250 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OOSP2Q86WS3 158 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC22A18ASQ8N1D0 253 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM46DQ8NEK8 389 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR9A2Q8NGT5 310 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 OR10G6Q8NH81 332 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 VANGL1Q8TAA9 524 aaPredicted RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TRUB1Q8WWH5 349 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 KLHL6Q8WZ60 621 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 YIPF6Q96EC8 236 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 TOE1Q96GM8 510 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FUZQ9BT04 418 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FNDC11Q9BVV2 318 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 FOXQ1Q9C009 403 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 ANKRD19PQ9H560 264 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CACYBPQ9HB71 228 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CLN6Q9NWW5 311 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 WSB2Q9NYS7 404 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms