RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NODALQ96S42 347 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 C5orf66Q9H5L9 145 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 C8orf33Q9H7E9 229 aaPredicted RBP4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 ATP13A3Q9H7F0 1226 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 HPS4Q9NQG7 708 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 TUBGCP4Q9UGJ1 667 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 RAB23Q9ULC3 237 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 CCL26Q9Y258 94 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 C2CD2Q9Y426 696 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 COLEC10Q9Y6Z7 277 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 SDK1Q7Z5N4 2213 aa4.93□□□□□ -1.62
RNU4-39P-201ENST00000362455 FANCMQ8IYD8 2048 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 MTMR11A4FU01 709 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 CACNB4O00305 520 aaPredicted RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 CDX4O14627 284 aaPredicted RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 TRAPPC3O43617 180 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 VEGFDO43915 354 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 NEMFO60524 1076 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 JAK2O60674 1132 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 CD48P09326 243 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 U2AF2P26368 475 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 RBMS1P29558 406 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 RPL9P32969 192 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 UCP2P55851 309 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 YBEYP58557 167 aaPredicted RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 KCNJ10P78508 379 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 SPAG1Q07617 926 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 IL17AQ16552 155 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 ACKR1Q16570 336 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 AGAP6Q5VW22 663 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 CENPPQ6IPU0 288 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 PRSS42Q7Z5A4 293 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 ASPGQ86U10 573 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 RALGPS2Q86X27 583 aaPredicted RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZBTB8OSQ8IWT0 167 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 PEX5LQ8IYB4 626 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 SMYD1Q8NB12 490 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 OR10T2Q8NGX3 314 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 APOBEC4Q8WW27 367 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 CCDC47Q96A33 483 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 RFT1Q96AA3 541 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 PGLYRP2Q96PD5 576 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 LPAR4Q99677 370 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 THAP9Q9H5L6 903 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 EGLN3Q9H6Z9 239 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 RPF1Q9H9Y2 349 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 PRDM4Q9UKN5 801 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 GCN1Q92616 2671 aaKnown RBP4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 IGSF10Q6WRI0 2623 aa4.92□□□□□ -1.62
RNU4-39P-201ENST00000362455 TTC26A0AVF1 554 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ARHGEF35A5YM69 484 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PP2D1A8MPX8 630 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 BLOC1S5-TXNDC5H3BN57 136 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 K7ERI5 159 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 TRDMT1O14717 391 aaKnown RBP4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZBTB14O43829 449 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 FAM189A1O60320 539 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 CDC123O75794 336 aaPredicted RBP4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 KRT33AO76009 404 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PRSS56P0CW18 603 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 HMGA1P17096 107 aaKnown RBP4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ATF6P18850 670 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 RPA1P27694 616 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 GABRR2P28476 465 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 SRD5A2P31213 254 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 OR3A3P47888 321 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PEX3P56589 373 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 RPP38P78345 283 aaKnown RBP4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 SLC34A1Q06495 639 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 MAPK11Q15759 364 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZNF74Q16587 644 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ARMCX4Q5H9R4 360 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 COX8CQ7Z4L0 72 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 C5orf24Q7Z6I8 188 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 SERPINA12Q8IW75 414 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 DCUN1D3Q8IWE4 304 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 FAM89BQ8N5H3 189 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 NIPA2Q8N8Q9 360 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 CLEC1AQ8NC01 280 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 STKLD1Q8NE28 680 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 OR8H1Q8NGG4 311 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 LRRC15Q8TF66 581 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PSMG2Q969U7 264 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 FAM46BQ96A09 425 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 LGALS12Q96DT0 336 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 GAL3ST4Q96RP7 486 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 TRIM7Q9C029 511 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ZNF71Q9NQZ8 489 aaPredicted RBP4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 COMMD8Q9NX08 183 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 EPHA6Q9UF33 1036 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 MOSPD1Q9UJG1 213 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 APPL1Q9UKG1 709 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PILRBQ9UKJ0 227 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 ICAM5Q9UMF0 924 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 PROCRQ9UNN8 238 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 NCKAP1Q9Y2A7 1128 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 COL4A2P08572 1712 aa4.91□□□□□ -1.62
RNU4-39P-201ENST00000362455 BPTFQ12830 3046 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms