RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 AKR7A3O95154 331 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 PAK4O96013 591 aaPredicted RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 FOLR2P14207 255 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 LAP3P28838 519 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 GABRA5P31644 462 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 CCR6P51684 374 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 RAP2BP61225 183 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 SEC61A1P61619 476 aaKnown RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 ZSWIM7Q19AV6 140 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 ZNF792Q3KQV3 632 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 SV2CQ496J9 727 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 ATAT1Q5SQI0 421 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 GCNT6Q5T4J0 391 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 PAQR3Q6TCH7 311 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 MILR1Q7Z6M3 343 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 ARMC10Q8N2F6 343 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 SYNPOQ8N3V7 929 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 OR5M3Q8NGP4 307 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 NDRG1Q92597 394 aaKnown RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 PAWRQ96IZ0 340 aaKnown RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 MS4A4EQ96PG1 132 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 NRBP2Q9NSY0 501 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 NME7Q9Y5B8 376 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 AP1M2Q9Y6Q5 423 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 NPEPPSL1A6NEC2 478 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 HMSDA8MTL9 139 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 SUV39H1O43463 412 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 S100A3P33764 101 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 CRYBA2P53672 197 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 HTR4Q13639 388 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 TMEM44Q2T9K0 475 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 EEF1DP3Q658K8 133 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 C3orf33Q6P1S2 294 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 MAMDC2Q7Z304 686 aaPredicted RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 TSPAN33Q86UF1 283 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 LRRC28Q86X40 367 aaPredicted RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 GPR135Q8IZ08 494 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 SPICQ8N5J4 248 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 OR10K1Q8NGX5 313 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 ACOT12Q8WYK0 555 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 MAP3K3Q99759 626 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 PTPN18Q99952 460 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 MINDY3Q9H8M7 445 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 NTMQ9P121 344 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 UBQLN1Q9UMX0 589 aaKnown RBP14.9□□□□□ -0.02
RTN3-205ENST00000356000 TMEM229AB2RXF0 380 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 PRKYO43930 277 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 C1QCP02747 245 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 HEXAP06865 529 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 NPR2P20594 1047 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 PSMA3P25788 255 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 PITPNBP48739 271 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 CDH12P55289 794 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 HSD17B7P56937 341 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 CHAF1BQ13112 559 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 GUCA2BQ16661 112 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 Q6ZTK2 550 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 TSSK6Q9BXA6 273 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 ARL6Q9H0F7 186 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 QRSL1Q9H0R6 528 aaKnown RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 ISYNA1Q9NPH2 558 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 MAFBQ9Y5Q3 323 aaPredicted RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 SHISA3A0PJX4 238 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 OR2M5A3KFT3 312 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 TLR4O00206 839 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 RGS14O43566 566 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 B3GALT4O96024 378 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 GPX2P18283 190 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 RBMS1P29558 406 aaKnown RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 SPIBQ01892 262 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 VEZF1Q14119 521 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 UQCC3Q6UW78 93 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 DBF4BQ8NFT6 615 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 GTPBP3Q969Y2 492 aaKnown RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 CPNE4Q96A23 557 aaPredicted RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 DOHHQ9BU89 302 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 R3HDMLQ9H3Y0 253 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 DHCR7Q9UBM7 475 aaKnown RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 ATXN7L1Q9ULK2 861 aaPredicted RBP14.89□□□□□ -0.03
RTN3-205ENST00000356000 KIAA1217Q5T5P2 1943 aa14.89□□□□□ -0.03
RTN3-205ENST00000356000 ETV5P41161 510 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 WNT4P56705 351 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 SSX2Q16385 188 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 ZC3H14Q6PJT7 736 aaKnown RBP14.88□□□□□ -0.03
RTN3-205ENST00000356000 LRRN1Q6UXK5 716 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 CIR1Q86X95 450 aaPredicted RBP14.88□□□□□ -0.03
RTN3-205ENST00000356000 SIAH3Q8IW03 269 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 TOMM5Q8N4H5 51 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 THAP6Q8TBB0 222 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 BEX1Q9HBH7 125 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 MGAT4CQ9UBM8 478 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 C9orf170A2RU37 121 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 RHPN2P1A8MT19 583 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 CLIC1O00299 241 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 OR7A17O14581 309 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 RFXANKO14593 260 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 PRAF2O60831 178 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 SCN2BO60939 215 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 CDC123O75794 336 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms