RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 PCDHGB5Q9Y5G0 923 aa14.12□□□□□ -0.15
COL17A1-201ENST00000353479 XPNPEP2O43895 674 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 FARS2O95363 451 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 HLA-DPB1P04440 258 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 CLUP10909 449 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 UGT2B7P16662 529 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 CCR2P41597 374 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 PSMD7P51665 324 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ERI1Q8IV48 349 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 OR9A4Q8NGU2 314 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ADAMTSL1Q8N6G6 1762 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 SEMA3DO95025 777 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 RPL13AP3Q6NVV1 102 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 QSOX2Q6ZRP7 698 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 OR13H1Q8NG92 308 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 EGLN2Q96KS0 407 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 DIABLOQ9NR28 239 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 TAF4O00268 1085 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 NAA10P41227 235 aaPredicted RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 CRISP1P54107 249 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ELOAQ14241 798 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ABHD17BQ5VST6 288 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 VAPAQ9P0L0 249 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 EXOSC1Q9Y3B2 195 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ARL6IP5O75915 188 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 IGLV3-25P01717 112 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 HMGN2P05204 90 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 DCNP07585 359 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 DPP6P42658 865 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ERV3-1Q14264 604 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 LILRA3Q8N6C8 439 aaPredicted RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 DENND6BQ8NEG7 585 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 FAM46AQ96IP4 442 aaKnown RBP14.11□□□□□ -0.15
COL17A1-201ENST00000353479 ING3Q9NXR8 418 aa14.11□□□□□ -0.15
COL17A1-201ENST00000353479 A0A1B0GVI7 797 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 H0YGG7 62 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 FESP07332 822 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ARF3P61204 181 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ST3GAL4Q11206 333 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SMCO1Q147U7 214 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 CLCA4Q14CN2 919 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 CAPSLQ8WWF8 208 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 PIK3R3Q92569 461 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF304Q9HCX3 659 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 M0R3H8 397 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 IGLV3-27P01718 113 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 HCKP08631 526 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 HK3P52790 923 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ARFRP1Q13795 201 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 PPP1R3BQ86XI6 285 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 RAB43Q86YS6 212 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF283Q8N7M2 679 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 UPB1Q9UBR1 384 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 H3BSA7 217 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ADAM8P78325 824 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 PITPNAQ00169 270 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 WDR53Q7Z5U6 358 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 C1orf216Q8TAB5 229 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SLC41A3Q96GZ6 507 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SLC39A1Q9NY26 324 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 GPR45Q9Y5Y3 372 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 H0YAE9 185 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ENTPD6O75354 484 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 OXSR1O95747 527 aaPredicted RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 HPRP00739 348 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 MMP2P08253 660 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 LHCGRP22888 699 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF84P51523 738 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 EXOSC7Q15024 291 aaKnown RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 CNPY1Q3B7I2 92 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ZNF773Q6PK81 442 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 FEVQ99581 238 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 MBNL1Q9NR56 388 aaKnown RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 PTTG2Q9NZH5 202 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 PISDQ9UG56 409 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 A6NL46 340 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 ABCB7O75027 752 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SORBS2O94875 1100 aaKnown RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 NDUFV2P19404 249 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 OR1D4P47884 311 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SRYQ05066 204 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 DTWD1Q8N5C7 304 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 OR52R1Q8NGF1 315 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 OR14L1PQ8NHC6 308 aa14.1□□□□□ -0.15
COL17A1-201ENST00000353479 BARD1Q99728 777 aaKnown RBP14.1□□□□□ -0.15
COL17A1-201ENST00000353479 SMIM30A4D0T7 59 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 VSTM5A8MXK1 200 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 LSM1O15116 133 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CDRT1O95170 752 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 CSTBP04080 98 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 ITGA5P08648 1049 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 NPRL3Q12980 569 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
COL17A1-201ENST00000353479 GTF2IRD2BQ6EKJ0 949 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 GTF2IRD2Q86UP8 949 aa14.09□□□□□ -0.15
COL17A1-201ENST00000353479 NRMQ8IXM6 262 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms