RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ZNF763Q0D2J5 394 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 TMEM44Q2T9K0 475 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 GAB4Q2WGN9 574 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CRTC2Q53ET0 693 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF805Q5CZA5 627 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CLLU1Q5K131 121 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 FAM205BPQ63HN1 556 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 REEP3Q6NUK4 255 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 FAM122CQ6P4D5 195 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 IKBIPQ70UQ0 350 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 PDZD3Q86UT5 571 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 ESX1Q8N693 406 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CHST14Q8NCH0 376 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 TOR1AIP2Q8NFQ8 470 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 OTULINQ96BN8 352 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 UBL7Q96S82 380 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 IL36AQ9UHA7 158 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 C7orf66A4D0T2 115 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 EPOPA6NHQ4 379 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 FAM170BA6NMN3 283 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 WWP2O00308 870 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 CASKO14936 926 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 H1F0P07305 194 aaKnown RBP15□□□□□ -0.01
HMGA1-202ENST00000347617 ACP2P11117 423 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 NAGAP17050 411 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 ITPKAP23677 461 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 VIPR1P32241 457 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 SPINT3P49223 89 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 DSTNP60981 165 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 HBA1P69905 142 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 HYAL1Q12794 435 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 DOC2AQ14183 400 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 GANABQ14697 944 aaKnown RBP15□□□□□ -0.01
HMGA1-202ENST00000347617 SEC23BQ15437 767 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 ATAT1Q5SQI0 421 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 CD276Q5ZPR3 534 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 THOC6Q86W42 341 aaKnown RBP15□□□□□ -0.01
HMGA1-202ENST00000347617 PHF6Q8IWS0 365 aaKnown RBP eCLIP15□□□□□ -0.01
HMGA1-202ENST00000347617 TCEANCQ8N8B7 351 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF680Q8NEM1 530 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 OR52P1PQ8NH57 321 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 HUS1BQ8NHY5 278 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 UCN3Q969E3 161 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 C1QTNF7Q9BXJ2 289 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 LIN7BQ9HAP6 207 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 SGK2Q9HBY8 427 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 TNFRSF10DQ9UBN6 386 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 CLCA3PQ9Y6N3 262 aa15□□□□□ -0.01
HMGA1-202ENST00000347617 KIF26AQ9ULI4 1882 aaPredicted RBP15□□□□□ -0.01
HMGA1-202ENST00000347617 CHD9Q3L8U1 2897 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 A0A1B0GVI7 797 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 GNG14A0A1W2PPG7 69 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 H3BN98 237 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 CHST10O43529 356 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 ANXA3P12429 323 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 ELAVL4P26378 380 aaKnown RBP14.99□□□□□ -0.01
HMGA1-202ENST00000347617 STOMP27105 288 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 TGM4P49221 684 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 SDE2Q6IQ49 451 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 TSPAN33Q86UF1 283 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 TMIEQ8NEW7 156 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 CYB5D2Q8WUJ1 264 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 APOBEC4Q8WW27 367 aaKnown RBP14.99□□□□□ -0.01
HMGA1-202ENST00000347617 TM9SF4Q92544 642 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 PPCDCQ96CD2 204 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 ATF6BQ99941 703 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 PRR14Q9BWN1 585 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 MYNNQ9NPC7 610 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 COMMD3Q9UBI1 195 aa14.99□□□□□ -0.01
HMGA1-202ENST00000347617 UPK3BL1B0FP48 263 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 C5orf58C9J3I9 102 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 UPK3BL2E5RIL1 263 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 BNIP3LO60238 219 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 OR10H3O60404 316 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 LEFTY1O75610 366 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 C6orf47O95873 294 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PRNPP04156 253 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 HLA-DPB1P04440 258 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 TIMP2P16035 220 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 CD22P20273 847 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 UQCRC2P22695 453 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SLC6A1P30531 599 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 RPS25P62851 125 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ACSM1Q08AH1 577 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ARSIQ5FYB1 569 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 CEACAM20Q6UY09 585 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 GET4Q7L5D6 327 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 C12orf40Q86WS4 652 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 GPR26Q8NDV2 337 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 OR4M2Q8NGB6 313 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 LHFPL5Q8TAF8 219 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 HGDQ93099 445 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ELSPBP1Q96BH3 223 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PDXPQ96GD0 296 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PPP1R16AQ96I34 528 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 OR2M2Q96R28 347 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 MTERF1Q99551 399 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 P2RY13Q9BPV8 354 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms