RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PAQR7Q86WK9 346 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 GALNT12Q8IXK2 581 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ENTHD1Q8IYW4 607 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 TCEANCQ8N8B7 351 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 TMEM52Q8NDY8 209 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 SNRNP27Q8WVK2 155 aaKnown RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 MMABQ96EY8 250 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 LRRC61Q9BV99 259 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 FUNDC2Q9BWH2 189 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 PHF7Q9BWX1 381 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 PCDHGA2Q9Y5H1 932 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ATG2AQ2TAZ0 1938 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 FGF17O60258 216 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 PDE9AO76083 593 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 DRD2P14416 443 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ATP6V1E1P36543 226 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 TUBA4AP68366 448 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 EMX1Q04741 257 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 MAD2L1BPQ15013 274 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 MAPK11Q15759 364 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 POMZP3Q6PJE2 187 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ABHD13Q7L211 337 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 CCDC71Q8IV32 467 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ZNF347Q96SE7 839 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 RBM38Q9H0Z9 239 aaKnown RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ACER3Q9NUN7 267 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 WDR45Q9Y484 360 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 HTR1AP08908 422 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 DBTP11182 482 aaKnown RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 CDC42P60953 191 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 NCS1P62166 190 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 PTGES3Q15185 160 aaKnown RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 FCRL6Q6DN72 434 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 BHLHB9Q6PI77 547 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 GATAD2AQ86YP4 633 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 SNX29P2Q8IUI4 249 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 AMER2Q8N7J2 671 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 USE1Q9NZ43 259 aa9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 GPR55Q9Y2T6 319 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-202ENST00000340209 URADA6NGE7 173 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 PROM1O43490 865 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 FOSL2P15408 326 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 KCNC4Q03721 635 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 LSAMPQ13449 338 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SOWAHCQ53LP3 525 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 CRB2Q5IJ48 1285 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 RBM48Q5RL73 367 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 C1orf189Q5VU69 101 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 B3GLCTQ6Y288 498 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ADCK1Q86TW2 530 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SUN3Q8TAQ9 357 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 GAL3ST3Q96A11 431 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SLC7A5P2Q9GIP4 190 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 MARCH7Q9H992 704 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ANKHQ9HCJ1 492 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 FBXO34Q9NWN3 711 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 RHPN2P1A8MT19 583 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 FFAR1O14842 300 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 EMC8O43402 210 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TLX2O43763 284 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 MFN2O95140 757 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 C7P10643 843 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 CPMP14384 443 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 GABRA3P34903 492 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 AHRP35869 848 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ATP1A4Q13733 1029 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 KIR2DS3Q14952 304 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 LPAL2Q16609 132 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 COLEC12Q5KU26 742 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TCTN3Q6NUS6 607 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 OR4K5Q8NGD3 323 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 WDR36Q8NI36 951 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SLC7A13Q8TCU3 470 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TBC1D20Q96BZ9 403 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ELP4Q96EB1 424 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 FAM46AQ96IP4 442 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ART5Q96L15 291 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TMEM38AQ9H6F2 299 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 UCKL1Q9NWZ5 548 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 PCDHGA6Q9Y5G7 932 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 DMDP11532 3685 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 CENPVL1A0A0U1RR11 272 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SPTY2D1-AS1A0A0U1RR47 76 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ZNF99A8MXY4 864 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ANXA8P13928 327 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ZNF10P21506 573 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 ZNF267Q14586 743 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 LAIR2Q6ISS4 152 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 PODNL1Q6PEZ8 512 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 TRIM69Q86WT6 500 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 CCDC103Q8IW40 242 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 SLC34A3Q8N130 599 aa9.55□□□□□ -0.88
RBFOX1-202ENST00000340209 CADM2Q8N3J6 435 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms