RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PDCD11Q14690 1871 aaKnown RBP11.3□□□□□ -0.6
USP1-201ENST00000339950 CACNA1EQ15878 2313 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 A0A1B0GVT2 93 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 GFYI3L273 518 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SLC9A3R1O14745 358 aaPredicted RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 PRKYO43930 277 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SLC2A10O95528 541 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SLC2A2P11168 524 aaPredicted RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 PCGF2P35227 344 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SOX18P35713 384 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 C11orf88Q6PI97 169 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 OR8J2Q8NGG1 315 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SLAMF7Q9NQ25 335 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 HEPACAM2A8MVW5 462 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 DYRK3O43781 588 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 CD6P30203 668 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 HOXD11P31277 338 aaPredicted RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 ZDHHC20Q5W0Z9 365 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 GDPD3Q7L5L3 318 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 KLHDC8AQ8IYD2 350 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 C7orf61Q8IZ16 206 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 TBC1D19Q8N5T2 526 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 FAM98AQ8NCA5 519 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 FATE1Q969F0 183 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 MSANTD3Q96H12 275 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 QRFPRQ96P65 431 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 CDADC1Q9BWV3 514 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 LOC102723532A0A0G2JNH3 316 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 CTSAP10619 480 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 GNG2P59768 71 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SRSF5Q13243 272 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 SP140Q13342 867 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 PLAG1Q6DJT9 500 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 ERN2Q76MJ5 926 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 CALHM3Q86XJ0 350 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 DCUN1D3Q8IWE4 304 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 DNAJB8Q8NHS0 232 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 WDR20Q8TBZ3 569 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 APH1BQ8WW43 257 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 NELL2Q99435 816 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 MBNL1Q9NR56 388 aaKnown RBP11.29□□□□□ -0.6
USP1-201ENST00000339950 KCNE3Q9Y6H6 103 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 SVILO95425 2214 aa11.29□□□□□ -0.6
USP1-201ENST00000339950 TRBV5-4A0A0C4DH59 114 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 H0Y8X5 98 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 HCN1O60741 890 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SLITRK5O94991 958 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 RHCEP18577 417 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 UQCRC2P22695 453 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SELENBP1Q13228 472 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 VEZF1Q14119 521 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SYNPOQ8N3V7 929 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 LRRC17Q8N6Y2 441 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 GPR174Q9BXC1 333 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 RANGRFQ9HD47 186 aaPredicted RBP11.28□□□□□ -0.6
USP1-201ENST00000339950 B3GNT3Q9Y2A9 372 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SOBPA7XYQ1 873 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 RPN2P04844 631 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 ACADMP11310 421 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 RPL3P39023 403 aaKnown RBP11.28□□□□□ -0.6
USP1-201ENST00000339950 RPS25P62851 125 aaKnown RBP11.28□□□□□ -0.6
USP1-201ENST00000339950 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SLC46A3Q7Z3Q1 461 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 CCDC120Q96HB5 630 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 DPH1Q9BZG8 443 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 PHPT1Q9NRX4 125 aaPredicted RBP11.28□□□□□ -0.6
USP1-201ENST00000339950 GPATCH2Q9NW75 528 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 PSME4Q14997 1843 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 NARSO43776 548 aaKnown RBP11.28□□□□□ -0.6
USP1-201ENST00000339950 FCMRO60667 390 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 B4GALT2O60909 372 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 ALPPP05187 535 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 TUBA1BP68363 451 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 BHLHB9Q6PI77 547 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 OR6C4Q8NGE1 309 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 SAMD8Q96LT4 415 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 FOXN4Q96NZ1 517 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 ANKMY1Q9P2S6 941 aa11.28□□□□□ -0.6
USP1-201ENST00000339950 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms