RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 NEIL2Q969S2 332 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.35□□□□□ -0.27
EPHB3-201ENST00000330394 OR2S2Q9NQN1 319 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 KCNK6Q9Y257 313 aa13.35□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF860A6NHJ4 632 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 BLOC1S5-TXNDC5H3BN57 136 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 LEFTY1O75610 366 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 TFP02787 698 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CD2P06729 351 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 ARSBP15848 533 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 GRK6P43250 576 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PLPP4Q5VZY2 271 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PSRC1Q6PGN9 363 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 BRAT1Q6PJG6 821 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 FCAMRQ8WWV6 532 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CNOT2Q9NZN8 540 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 STOX2Q9P2F5 926 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 UPB1Q9UBR1 384 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 AK6Q9Y3D8 172 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SOCS7O14512 581 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 AKR7A2O43488 359 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CREBL2O60519 120 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 TGM1P22735 817 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 GIPRP48546 466 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PGDP52209 483 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RPS25P62851 125 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 GRK1Q15835 563 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 JAGN1Q8N5M9 183 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SPRYD4Q8WW59 207 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CUEDC1Q9NWM3 386 aaPredicted RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 ELOVL2Q9NXB9 296 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 NLGN3Q9NZ94 848 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SOCS5O75159 536 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RAB3BP20337 219 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 DDCP20711 480 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PTPN6P29350 595 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SLC19A1P41440 591 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RPS5P46782 204 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PITPNBP48739 271 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CAP1Q01518 475 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 HES5Q5TA89 166 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM107Q6UX40 140 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RIMKLAQ8IXN7 391 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 UBQLNLQ8IYU4 475 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 ADAMTS19Q8TE59 1207 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 THEM6Q8WUY1 208 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CDADC1Q9BWV3 514 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 RBFOX1Q9NWB1 397 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 TRBV2A0A0J9YWF9 115 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 GPR37L1O60883 481 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 PDGFAP04085 211 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 HSD3B1P14060 373 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 HSD3B2P26439 372 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CMPK1P30085 196 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 UGT2B10P36537 528 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 FANK1Q8TC84 345 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 GLYATL1Q969I3 302 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 NUS1Q96E22 293 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 SAMD8Q96LT4 415 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
EPHB3-201ENST00000330394 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
EPHB3-201ENST00000330394 MT-ND4P03905 459 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 HRGP04196 525 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 GTF2F2P13984 249 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 STXBP1P61764 594 aaKnown RBP13.33□□□□□ -0.28
EPHB3-201ENST00000330394 COX20Q5RI15 118 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 PAQR6Q6TCH4 344 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 RFLNAQ6ZTI6 216 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 PDZD9Q8IXQ8 264 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 TOR1AIP2Q8NFQ8 470 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 TESCQ96BS2 214 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 SOHLH2Q9NX45 425 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 NDUFAF4Q9P032 175 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 RBBP9O75884 186 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 SOX30O94993 753 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 PRH1P02810 166 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 NDUFV2P19404 249 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 AHRP35869 848 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 MAP3K8P41279 467 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 MGAT3Q09327 533 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
EPHB3-201ENST00000330394 SMCO1Q147U7 214 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 GFOD2Q3B7J2 385 aa13.33□□□□□ -0.28
EPHB3-201ENST00000330394 KLHL26Q53HC5 615 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms