RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 RAB3BP20337 219 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 CERS1P27544 350 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ACVRL1P37023 503 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 RCAN2Q14206 197 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 GK2Q14410 553 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 NKPD1Q17RQ9 610 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SLC43A2Q8N370 569 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OR52P1PQ8NH57 321 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 OR51Q1Q8NH59 317 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 MYLIPQ8WY64 445 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 DIO2Q92813 273 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ISOC1Q96CN7 298 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 SLC6A16Q9GZN6 736 aa9.92□□□□□ -0.82
CLIP1-201ENST00000302528 ZBTB20Q9HC78 741 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-201ENST00000302528 XRN1Q8IZH2 1706 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 OR6C65A6NJZ3 312 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 J3KR12 359 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SYT7O43581 403 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 DUX1O43812 170 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 KIAA0513O60268 411 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 CLIC3O95833 236 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 AOC1P19801 751 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 RAB6AP20340 208 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF423Q2M1K9 1284 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 C22orf39Q6P5X5 142 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 MEX3BQ6ZN04 569 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 KCTD20Q7Z5Y7 419 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 CMTM8Q8IZV2 173 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 KCNA7Q96RP8 456 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 FTSJ1Q9UET6 329 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SLC2A6Q9UGQ3 507 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 LIPT1Q9Y234 373 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 RPL23AP62750 156 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ERVK-25P63136 954 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 PAN3Q58A45 887 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 OR4N5Q8IXE1 308 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 OR52E2Q8NGJ4 325 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 OR2T4Q8NH00 348 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 IRF7Q92985 503 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SPTSSAQ969W0 71 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 DDIT4LQ96D03 193 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 RSPRY1Q96DX4 576 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 HYLS1Q96M11 299 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 FBRSL1Q9HCM7 1045 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ARMC1Q9NVT9 282 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 STUB1Q9UNE7 303 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 FBXO7Q9Y3I1 522 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ATRNL1Q5VV63 1379 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 KDM4FA0A1W2PPD8 638 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 APOA2P02652 100 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 LCATP04180 440 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 TYRP14679 529 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 KITLGP21583 273 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 TNFSF4P23510 183 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SYPL2Q5VXT5 272 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 LEG1Q6P5S2 330 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 MRPL21Q7Z2W9 205 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 HMGN2P46Q86SG4 172 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 BEST4Q8NFU0 473 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 FUNDC2Q9BWH2 189 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 GPR34Q9UPC5 381 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 PAHP00439 452 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 INHAP05111 366 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 APLNRP35414 380 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 EEF1A1P68104 462 aaKnown RBP9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SLC10A1Q14973 349 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF440Q8IYI8 595 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ACBD7Q8N6N7 88 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF75AQ96N20 296 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 MRIQ9BWK5 157 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 SLIT3O75094 1523 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 PIK3C2AO00443 1686 aa9.91□□□□□ -0.82
CLIP1-201ENST00000302528 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 TEX51A0A1B0GUA7 166 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 GJE1A6NN92 205 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 WNT7AO00755 349 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KIAA0355O15063 1070 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 CNTN5O94779 1100 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 DCNP07585 359 aaKnown RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 HLA-EP13747 358 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 PRPH2P23942 346 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 OTX2P32243 289 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MAGEB1P43366 347 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 ANKRD54Q6NXT1 300 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 EPGNQ6UW88 154 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 CLEC20AQ6ZU45 233 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 MAMDC2Q7Z304 686 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-201ENST00000302528 IGFN1Q86VF2 1251 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 UEVLDQ8IX04 471 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 OR8J1Q8NGP2 316 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 NPRL2Q8WTW4 380 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 DOHHQ9BU89 302 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 HDHD5Q9BXW7 423 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 SYNPO2LQ9H987 977 aa9.9□□□□□ -0.82
CLIP1-201ENST00000302528 KIF25Q9UIL4 384 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms