RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ELAVL3Q14576 367 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 HNRNPA1L2Q32P51 320 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CCDC92Q53HC0 331 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ADAMTSL4Q6UY14 1074 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SLC34A3Q8N130 599 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 NR4A3Q92570 626 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 RGMAQ96B86 450 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 COX14Q96I36 57 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 TPSD1Q9BZJ3 242 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 DDX31Q9H8H2 851 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 BCL2L10Q9HD36 194 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SSR3Q9UNL2 185 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CTDSP2O14595 271 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 IL1AP01583 271 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 GSTM3P21266 225 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CCT3P49368 545 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 BNC1Q01954 994 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ZNF91Q05481 1191 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 RPS26P11Q5JNZ5 115 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ZNF544Q6NX49 715 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 TMEM53Q6P2H8 277 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 MMP21Q8N119 569 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CLDN22Q8N7P3 220 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ANKRD53Q8N9V6 530 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SLC7A13Q8TCU3 470 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 RAB7BQ96AH8 199 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 TREX2Q9BQ50 279 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 CNPPD1Q9BV87 410 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SORBS1Q9BX66 1292 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 POLR2J2Q9GZM3 115 aaKnown RBP12.18□□□□□ -0.46
C9orf3-201ENST00000277198 ISYNA1Q9NPH2 558 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 MMP17Q9ULZ9 603 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SLC9A8Q9Y2E8 581 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SNX11Q9Y5W9 270 aa12.18□□□□□ -0.46
C9orf3-201ENST00000277198 SPTBN4Q9H254 2564 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 MYL12BO14950 172 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TPST2O60704 377 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 NME6O75414 186 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-201ENST00000277198 DNTTP04053 509 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 SPNP16150 400 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 RPS19P39019 145 aaKnown RBP12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TARDBPQ13148 414 aaKnown RBP eCLIP12.17□□□□□ -0.46
C9orf3-201ENST00000277198 KLHL22Q53GT1 634 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 PRAMEF8Q5VWM4 474 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 PRAMEF7Q5VXH5 474 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 BHLHB9Q6PI77 547 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TMEM64Q6YI46 380 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TMPRSS11AQ6ZMR5 421 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 FAM83HQ6ZRV2 1179 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-201ENST00000277198 FRMD1Q8N878 549 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TTLQ8NG68 377 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 OR5AR1Q8NGP9 310 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 BBS10Q8TAM1 723 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 F2RL3Q96RI0 385 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TSSK6Q9BXA6 273 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 SLC6A17Q9H1V8 727 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 TAC3Q9UHF0 121 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 KLHL20Q9Y2M5 609 aa12.17□□□□□ -0.46
C9orf3-201ENST00000277198 CASC3O15234 703 aaKnown RBP12.16□□□□□ -0.46
C9orf3-201ENST00000277198 SLC28A2O43868 658 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 B4GALT2O60909 372 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 CLEC3AO75596 197 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-201ENST00000277198 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 ARFIP1P53367 373 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
C9orf3-201ENST00000277198 EFNB1P98172 346 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 HSPB3Q12988 150 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 C3orf38Q5JPI3 329 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 METRNLQ641Q3 311 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 C1orf94Q6P1W5 598 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 DEF8Q6ZN54 512 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 WDR5BQ86VZ2 330 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 PHC2Q8IXK0 858 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 RAB42Q8N4Z0 105 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 ZNF366Q8N895 744 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 TCEANCQ8N8B7 351 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 TSTD1Q8NFU3 115 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 RAB8BQ92930 207 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 SLC6A18Q96N87 628 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 OR2A14Q96R47 310 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 KCNS3Q9BQ31 491 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 MED18Q9BUE0 208 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 EXOSC4Q9NPD3 245 aaKnown RBP12.16□□□□□ -0.46
C9orf3-201ENST00000277198 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
C9orf3-201ENST00000277198 DNAJC27Q9NZQ0 273 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms