RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 XPNPEP2O43895 674 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 RAB36O95755 333 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 MMP2P08253 660 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 UGT2B7P16662 529 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 TAP2Q03519 686 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 DSG2Q14126 1118 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 E2F2Q14209 437 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 TRIM61Q5EBN2 209 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 PPP1R3BQ86XI6 285 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 CNIH3Q8TBE1 160 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SRA1Q9HD15 236 aaKnown RBP12.99□□□□□ -0.33
NPC1-201ENST00000269228 TRNAU1APQ9NX07 287 aaKnown RBP12.99□□□□□ -0.33
NPC1-201ENST00000269228 PISDQ9UG56 409 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 A0A1B0GTW7 788 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ACOX3O15254 700 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ATP6V1G1O75348 118 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 DPP6P42658 865 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SGCAQ16586 387 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 JAGN1Q8N5M9 183 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ZNF304Q9HCX3 659 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 PLEKHM1Q9Y4G2 1056 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 K7ESM1 405 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 HTR1AP08908 422 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ELK4P28324 431 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 OR1D4P47884 311 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SCN1BQ07699 218 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 ELOAQ14241 798 aaKnown RBP12.99□□□□□ -0.33
NPC1-201ENST00000269228 LINGO2Q7L985 606 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 PJA1Q8NG27 643 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 RDH12Q96NR8 316 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 BIRC8Q96P09 236 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 IFT46Q9NQC8 304 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 GPR45Q9Y5Y3 372 aa12.99□□□□□ -0.33
NPC1-201ENST00000269228 SLC35F4A4IF30 521 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 FARS2O95363 451 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 PNLDC1Q8NA58 520 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 NAXEQ8NCW5 288 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 FGF14Q92915 247 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 PDXPQ96GD0 296 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 FEVQ99581 238 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 C6orf106Q9H6K1 298 aaPredicted RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 SESN1Q9Y6P5 492 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 RASAL1O95294 804 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 CRISP1P54107 249 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ADPRHP54922 357 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 RPS3AP61247 264 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 MEDAGQ5VYS4 303 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 BICRALQ6AI39 1079 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ENDOVQ8N8Q3 282 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 NSMAFQ92636 917 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 GAREM1Q9H706 876 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 SLC39A1Q9NY26 324 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 CLDN25C9JDP6 229 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 M0R3H8 397 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 BRINP1O60477 761 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 HLA-DPB1P04440 258 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 RACK1P63244 317 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 GPR18Q14330 331 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 EXOSC7Q15024 291 aaKnown RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 ZNF627Q7L945 461 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 WDR53Q7Z5U6 358 aaPredicted RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 CLEC14AQ86T13 490 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 PLPP6Q8IY26 295 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ZNF101Q8IZC7 436 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 DCSTAMPQ9H295 470 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 MAGIXQ9H6Y5 334 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ZNF879B4DU55 563 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 H0Y8X5 98 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 FESP07332 822 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 NPIPA8P0DM63 369 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 AHRP35869 848 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 IST1P53990 364 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ST3GAL4Q11206 333 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 ATOH1Q92858 354 aaPredicted RBP12.98□□□□□ -0.33
NPC1-201ENST00000269228 TIGARQ9NQ88 270 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 MCM3APO60318 1980 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 LY75O60449 1722 aa12.98□□□□□ -0.33
NPC1-201ENST00000269228 A6NL46 340 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 MT-ND5P03915 603 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 CD27P26842 260 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 RAB25P57735 213 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 HENMT1Q5T8I9 393 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 SBSNQ6UWP8 590 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 ERI1Q8IV48 349 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms