RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 CTNNB1P35222 781 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 VIPR2P41587 438 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 HTRA4P83105 476 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-201ENST00000238112 SLC9A5Q14940 896 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 DDI2Q5TDH0 399 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 OR2G6Q5TZ20 316 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 SLC27A4Q6P1M0 643 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 ZNF793Q6ZN11 406 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 UTS2BQ765I0 119 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 TP53I13Q8NBR0 393 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-201ENST00000238112 SLC9A6Q92581 669 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 TRIM43Q96BQ3 446 aaPredicted RBP17.64■□□□□ 0.41
CPSF3-201ENST00000238112 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 PLA2G12AQ9BZM1 189 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 SLC22A4Q9H015 551 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 N6AMT1Q9Y5N5 214 aa17.64■□□□□ 0.41
CPSF3-201ENST00000238112 TCF20Q9UGU0 1960 aaKnown RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TMEM129A0AVI4 362 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 MAN2B1O00754 1011 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SLC30A4O14863 429 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TMCC2O75069 709 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SDC2P34741 201 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 IFNGR2P38484 337 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TAS2R41P59536 307 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 EFNB1P98172 346 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 PLK5Q496M5 336 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 GLYR1Q49A26 553 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TMEM64Q6YI46 380 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 HSDL2Q6YN16 418 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 KIF18BQ86Y91 864 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FAM181AQ8N9Y4 354 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TTLQ8NG68 377 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 GATAD2BQ8WXI9 593 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 UFD1Q92890 307 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 RSPRY1Q96DX4 576 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 PHOX2BQ99453 314 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 PINK1Q9BXM7 581 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 MARCH7Q9H992 704 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TOR4AQ9NXH8 423 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 PLEKHB1Q9UF11 243 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SLC13A4Q9UKG4 626 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SNX7Q9UNH6 387 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 DNMT3AQ9Y6K1 912 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 A0A0G2JPF8 293 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 HNRNPCL2B2RXH8 293 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 HNRNPCL3B7ZW38 293 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FAM47E-STBD1D6RA91 191 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 RGS13O14921 159 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TFECO14948 347 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 STATHP02808 62 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 HMGN2P05204 90 aaKnown RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 HNRNPCL4P0DMR1 293 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 ALPPL2P10696 532 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 RPS25P62851 125 aaKnown RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FUT5Q11128 374 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 ZFP69Q49AA0 526 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FLYWCH1Q4VC44 716 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 CRTC2Q53ET0 693 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 TMEM35AQ53FP2 167 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 PRR23CQ6ZRP0 262 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 C11orf74Q86VG3 221 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 MEX3DQ86XN8 651 aaKnown RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SFTPA1Q8IWL2 248 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SUSD6Q92537 303 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 AP3S1Q92572 193 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FGF11Q92914 225 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 RAB7BQ96AH8 199 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 C12orf66Q96MD2 445 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SLC38A2Q96QD8 506 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 SAP130Q9H0E3 1048 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 MIXL1Q9H2W2 232 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 OSGEPL1Q9H4B0 414 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 FGF20Q9NP95 211 aaPredicted RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 GPR52Q9Y2T5 361 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 YARS2Q9Y2Z4 477 aaKnown RBP17.63■□□□□ 0.41
CPSF3-201ENST00000238112 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
CPSF3-201ENST00000238112 IGLON5A6NGN9 336 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 NFATC1O95644 943 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 MTNR1AP48039 350 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 PRDX1Q06830 199 aaKnown RBP17.62■□□□□ 0.41
CPSF3-201ENST00000238112 ASAH1Q13510 395 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 GDPD1Q8N9F7 314 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 SFXN5Q8TD22 340 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 GNPDA2Q8TDQ7 276 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 CAMK1GQ96NX5 476 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 MED18Q9BUE0 208 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 HDAC8Q9BY41 377 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 PRRG3Q9BZD7 231 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 TMEM245Q9H330 911 aa17.62■□□□□ 0.41
CPSF3-201ENST00000238112 MRPS18AQ9NVS2 196 aaKnown RBP17.62■□□□□ 0.41
CPSF3-201ENST00000238112 A0A087WUU8 490 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 MEIOCA2RUB1 952 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 CCDC182A6NF36 153 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 FAM170BA6NMN3 283 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 GJA8P48165 433 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 MAN2A2P49641 1150 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 GAS1P54826 345 aa17.61■□□□□ 0.41
CPSF3-201ENST00000238112 MRPS15P82914 257 aaKnown RBP17.61■□□□□ 0.41
CPSF3-201ENST00000238112 SLAMF1Q13291 335 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms