RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TUBG1P23258 451 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 DEFB103AP81534 67 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 PDE7AQ13946 482 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 CDNFQ49AH0 187 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 SEC14L1Q92503 715 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 CNN2Q99439 309 aaKnown RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 ZNF160Q9HCG1 818 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 TRNAU1APQ9NX07 287 aaKnown RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 KCND3Q9UK17 655 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 A0A0A6YYC8 382 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 SLC9B1P1A6NJY1 282 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 I3L1I5 382 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 YY2O15391 372 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 HK3P52790 923 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 CTXN1P60606 82 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 KIAA1614Q5VZ46 1190 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 LEG1Q6P5S2 330 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 TLDC1Q6P9B6 456 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 SHFQ7M4L6 423 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 HMGN2P46Q86SG4 172 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 ZFAND4Q86XD8 727 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 SLC2A13Q96QE2 648 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 OR52B2Q96RD2 323 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 ENAMQ9NRM1 1142 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 HCFC1R1Q9NWW0 138 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 MKLN1Q9UL63 735 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 EMC9Q9Y3B6 208 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 COL1A1P02452 1464 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 TRBV11-1A0A0K0K1C0 115 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 GLDCP23378 1020 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 ITGB7P26010 798 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 XCR1P46094 333 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 DAP3P51398 398 aaKnown RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 NKPD1Q17RQ9 610 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 HNRNPA1L2Q32P51 320 aaKnown RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 MANEALQ5VSG8 457 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 MCATQ8IVS2 390 aaKnown RBP10.04□□□□□ -0.8
TRPS1-201ENST00000220888 GALNT15Q8N3T1 639 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 PRR18Q8N4B5 295 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 PACRGLQ8N7B6 248 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 RSC1A1Q92681 617 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 FKBP10Q96AY3 582 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 DCSTAMPQ9H295 470 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 OBP2BQ9NPH6 170 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 EURLQ9NYK6 297 aa10.04□□□□□ -0.8
TRPS1-201ENST00000220888 TMEM131LA2VDJ0 1609 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 LOC102725191A0A1B0GVB3 256 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MDFIC2A0A1B0GVS7 189 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 A6NIZ1 184 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 EEF1E1-BLOC1S5C9J1V9 151 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 EEF1E1O43324 174 aaKnown RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MT-CO2P00403 227 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 S100A7P31151 101 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PSMA6P60900 246 aaKnown RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 RAP1BP61224 184 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 RAP1AP62834 184 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 ARL6IP1Q15041 203 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PPA1Q15181 289 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PRR22Q8IZ63 422 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 FITM2Q8N6M3 262 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MRPL43Q8N983 215 aaKnown RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 OR5J2Q8NH18 312 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PAAF1Q9BRP4 392 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 UCKL1Q9NWZ5 548 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TUBA8Q9NY65 449 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 TAS2R1Q9NYW7 299 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 KCMF1Q9P0J7 381 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 A0A096LPI6 279 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 RDH16O75452 317 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 GABBR2O75899 941 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 GNAO1P09471 354 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 EN2P19622 333 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CSNK1A1P48729 337 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 DEFA5Q01523 94 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 UBE2UQ5VVX9 321 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 HUS1BQ8NHY5 278 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CD300LFQ8TDQ1 290 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 PIP5K1AQ99755 562 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MTHFD2LQ9H903 347 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 A0A1B0GTW7 788 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 WDPCPO95876 746 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MAOBP27338 520 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 CPOXP36551 454 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MC3RP41968 323 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 COL9A2Q14055 689 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 ATXN7L3Q14CW9 347 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-201ENST00000220888 NTRK2Q16620 822 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 MDGA1Q8NFP4 955 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SCRN2Q96FV2 425 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 DMRTB1Q96MA1 342 aa10.03□□□□□ -0.8
TRPS1-201ENST00000220888 SYT3Q9BQG1 590 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms