RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 LACC1Q8IV20 430 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 P3H2Q8IVL5 708 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 TRIM48Q8IWZ4 208 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ACOT4Q8N9L9 421 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 AQP11Q8NBQ7 271 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PJA1Q8NG27 643 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 CSF3RQ99062 836 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 BTBD2Q9BX70 525 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 OR51I1Q9H343 314 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 TEKT2Q9UIF3 430 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 MUTYHQ9UIF7 546 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PCDHGB3Q9Y5G1 929 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PLRG1O43660 514 aaKnown RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 HPRP00739 348 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PPIBP23284 216 aaKnown RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 TPMTP51580 245 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ITGA1P56199 1179 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 SIM1P81133 766 aaPredicted RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 REEP5Q00765 189 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PDE7AQ13946 482 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP11-201ENST00000218348 TEAD4Q15561 434 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 GPR155Q7Z3F1 870 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ZNF438Q7Z4V0 828 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 AMIGO1Q86WK6 493 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 CADM2Q8N3J6 435 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 OXR1Q8N573 874 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ABHD11Q8NFV4 315 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 RPL3LQ92901 407 aaKnown RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 TBC1D20Q96BZ9 403 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 BMFQ96LC9 184 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 FUNDC2Q9BWH2 189 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ZNF624Q9P2J8 865 aaPredicted RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 SEC14L3Q9UDX4 400 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 APOBEC3BQ9UH17 382 aaKnown RBP9.4□□□□□ -0.9
USP11-201ENST00000218348 PCOLCE2Q9UKZ9 415 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 ANGPT4Q9Y264 503 aa9.4□□□□□ -0.9
USP11-201ENST00000218348 FANCMQ8IYD8 2048 aa9.4□□□□□ -0.91
USP11-201ENST00000218348 TRBV4-1A0A0J9YWV2 114 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR6C74A6NCV1 312 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CLEC2LP0C7M8 214 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 UQCRC2P22695 453 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 HTR1BP28222 390 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 LIM2P55344 173 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 SLC9A5Q14940 896 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 ZNF300Q96RE9 604 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 MAPKAP1Q9BPZ7 522 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 RERGLQ9H628 205 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 USE1Q9NZ43 259 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 MAT2BQ9NZL9 334 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CORO2BQ9UQ03 480 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 MRPS7Q9Y2R9 242 aaKnown RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 H3BN98 237 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR10H3O60404 316 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CHRM5P08912 532 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 MAOBP27338 520 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 MC3RP41968 323 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 VBP1P61758 197 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 ZNF33BQ06732 778 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 GRSF1Q12849 480 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP11-201ENST00000218348 ZMYND11Q15326 602 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 ZNF829Q3KNS6 432 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 REEP3Q6NUK4 255 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 Q6ZSR6 202 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 PRSS41Q7RTY9 318 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 UBALD2Q8IYN6 164 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR4D11Q8NGI4 311 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CREB3L4Q8TEY5 395 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 SIRT3Q9NTG7 399 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 ENOPH1Q9UHY7 261 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 PRAMEF27A3QJZ7 478 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR2W5A6NFC9 320 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CENPBD1B2RD01 187 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 APOL3O95236 402 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 AIFM1O95831 613 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 IFNW1P05000 195 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 ZNF888P0CJ79 500 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 BMXP51813 675 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 SPCS2Q15005 226 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CAMKMTQ7Z624 323 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 GJD3Q8N144 294 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 OR13H1Q8NG92 308 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 MARC2Q969Z3 335 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 MS4A6EQ96DS6 147 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 NRBF2Q96F24 287 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 CNRIP1Q96F85 164 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 ZBED6CLQ96FA7 236 aaPredicted RBP9.39□□□□□ -0.91
USP11-201ENST00000218348 DEPDC7Q96QD5 511 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 APOL4Q9BPW4 351 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms