RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CD79BP40259 229 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 RGS4P49798 205 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 DUSP4Q13115 394 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ATXN7L3Q14CW9 347 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SPIN4Q56A73 249 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 Q6ZTK2 550 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 OR52I1Q8NGK6 324 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 LGI1O95970 557 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 HLA-DPB1P04440 258 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 EIF4EP06730 217 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 S100A11P31949 105 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 AIF1P55008 147 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 UBE2MP61081 183 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 DGCR2P98153 550 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 TSC22D1Q15714 1073 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SSX6Q7RTT6 188 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SERPINA12Q8IW75 414 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ZNF671Q8TAW3 534 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 CD200R1Q8TD46 325 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 MRPS24Q96EL2 167 aaKnown RBP13.89□□□□□ -0.19
PTPRA-201ENST00000216877 ABHD1Q96SE0 405 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SMOQ99835 787 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
PTPRA-201ENST00000216877 TRBV5-3A0A0A0MS03 114 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 TRBV4-1A0A0J9YWV2 114 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 MGAT4DA6NG13 374 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 A8MXK9 166 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 C5orf58C9J3I9 102 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 CLDN9O95484 217 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 IGF2P01344 180 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 GBAP04062 536 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 IFNW1P05000 195 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ACAA1P09110 424 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 TLE2Q04725 743 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SCAPQ12770 1279 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 BEX5Q5H9J7 111 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 C3orf38Q5JPI3 329 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 GSG1LQ6UXU4 331 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 KLBQ86Z14 1044 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 PRR14Q9BWN1 585 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 OSGEPL1Q9H4B0 414 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 MKL2Q9ULH7 1088 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 OR2W5A6NFC9 320 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 E9PI62 339 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 GABRPO00591 440 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 WISP3O95389 354 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 CTSCP53634 463 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ACSM2AQ08AH3 577 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SCARB2Q14108 478 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 HLXQ14774 488 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 DCST1Q5T197 706 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ACSM2BQ68CK6 577 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SLC27A4Q6P1M0 643 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 NCEH1Q6PIU2 408 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 NHLRC1Q6VVB1 395 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 JAZF1Q86VZ6 243 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SLITRK4Q8IW52 837 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 OR8J1Q8NGP2 316 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 PCED1BQ96HM7 432 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 RPS6KB2Q9UBS0 482 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ZNF214Q9UL59 606 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ANKDD1BA6NHY2 528 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 HBP1O60381 514 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 FMO6PO60774 539 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SLC25A27O95847 323 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 PTSQ03393 145 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 IHHQ14623 411 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 CLINT1Q14677 625 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 LRIF1Q5T3J3 769 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 FAM27D1Q5T7N8 215 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 LINGO2Q7L985 606 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 PEX11GQ96HA9 241 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 RPRD1AQ96P16 312 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-201ENST00000216877 DUSP26Q9BV47 211 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 MED16Q9Y2X0 877 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 PCDHGC4Q9Y5F7 938 aa13.88□□□□□ -0.19
PTPRA-201ENST00000216877 SLC19A2O60779 497 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 STK16O75716 305 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 PTNP21246 168 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 TWF1Q12792 350 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 RAB33AQ14088 237 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 MEDAGQ5VYS4 303 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 METAP1DQ6UB28 335 aaPredicted RBP13.87□□□□□ -0.19
PTPRA-201ENST00000216877 CMIPQ8IY22 773 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 CHCHD4Q8N4Q1 142 aa13.87□□□□□ -0.19
PTPRA-201ENST00000216877 GPR26Q8NDV2 337 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms