RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Cacng3Q9JJV5 315 aa12.08□□□□□ -0.47
Msh6-201ENSMUST00000005503 Ilf3Q9Z1X4 898 aaKnown RBP12.08□□□□□ -0.47
Msh6-201ENSMUST00000005503 Trbv20A0A0B4J1H5 111 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Zfp978A2A7I1 335 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Vmn2r18E9Q280 788 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Zfp995E9Q6M3 437 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ccdc149F6V035 524 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Cx3cl1O35188 395 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ccrl2O35457 360 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Map2k4P47809 397 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 HccsP53702 272 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Atf4Q06507 349 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Malt1Q2TBA3 832 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Arhgef39Q66JY6 344 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Vangl1Q80Z96 526 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Nedd4lQ8CFI0 1004 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Olfr202Q8VGQ3 307 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ndufs4Q9CXZ1 175 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Prl8a6Q9DAY2 240 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ccdc107Q9DCC3 242 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Bco1Q9JJS6 566 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Hipk2Q9QZR5 1196 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 9630041A04RikD3Z3U4 205 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Yes1Q04736 541 aaKnown RBP12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 HgfQ08048 728 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Hhla1Q3TYV2 514 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ostf1Q62422 215 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Vat1Q62465 406 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ppp3r1Q63810 170 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 PtprcapQ64697 197 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Camk1Q91YS8 374 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Qrsl1Q9CZN8 525 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Phf6Q9D4J7 364 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Pmepa1Q9D7R2 260 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Olfr705Q9EPF7 316 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Avpr1bQ9WU02 421 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Olfr631F8VPJ9 319 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Zfp989H3BLB0 661 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Gm6356L7N2A7 188 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ephb6O08644 1014 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 GcatO88986 416 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Cyp17a1P27786 507 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Hsf2P38533 535 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ffar3Q3UFD7 319 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Dnaaf3Q3UYV8 586 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Adh7Q64437 374 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Gm5346Q7M766 736 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Eri1Q7TMF2 345 aaKnown RBP12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Cyp51a1Q8K0C4 503 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 ScgnQ91WD9 276 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ropn1lQ9EQ00 218 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Akr1a1Q9JII6 325 aa12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Eif4hQ9WUK2 248 aaKnown RBP12.08□□□□□ -0.48
Msh6-201ENSMUST00000005503 Alkal1J3QPP8 127 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Sypl1O09117 261 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Aqp2P56402 271 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Tspan5P62080 268 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Cd34Q64314 382 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Tvp23aQ6NVH0 222 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Supv3l1Q80YD1 779 aaKnown RBP12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Adam29Q811Q4 763 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Tmem200aQ8C817 491 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Zc2hc1cQ8CCG1 527 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Scara5Q8K299 491 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Olfr63Q8VBW9 316 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 3300002I08RikQ9CXH3 147 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ptges3lQ9D9A7 131 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Itgb6Q9Z0T9 787 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 PappaQ8R4K8 1624 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 1700001O22RikA2APZ1 375 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Skint4A7TZF3 474 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Gm14744B1AVU4 173 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 4930595D18RikD3Z642 64 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Vmn2r111K7N674 857 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 FgrP14234 517 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ntrk2P15209 821 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 IduaP48441 634 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Dsc1P55849 886 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Stx4P70452 298 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Pde7aP70453 456 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Wbp2P97765 261 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Tmed3Q78IS1 221 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ostm1Q8BGT0 338 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Q8C3W1 322 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Q8CF31 99 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Il17rdQ8JZL1 738 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ankrd54Q91WK7 299 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 5430402E10RikQ9D3N5 173 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Cpn2Q9DBB9 547 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Clca3a2Q9EQR4 902 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Msgn1Q9JK54 188 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Sorcs1Q9JLC4 1167 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Clca3a1Q9QX15 902 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 C4bP01029 1738 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Slc25a25A2ASZ8 469 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 4930595M18RikA2RRY9 829 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Ap1arE9PYF7 298 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Il13ra1O09030 424 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Man2b2O54782 1018 aa12.07□□□□□ -0.48
Msh6-201ENSMUST00000005503 Pdlim1O70400 327 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms