RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm8922F6XVS9 199 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Sult3a2G5E904 293 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Vmn2r9K7N6Z8 848 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm4141K9J7H2 306 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Fkbp8O35465 402 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Rgs7O54829 469 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Sh3pxd2aO89032 1124 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Psmd3P14685 530 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Hoxd9P28357 339 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Tacr1P30548 407 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Btbd3P58545 530 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Ythdf1P59326 559 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Teddm2Q208S0 260 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Col28a1Q2UY11 1141 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Defb41Q30KP6 65 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Alg6Q3TAE8 507 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Xrra1Q3U3V8 786 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Zc3hav1Q3UPF5 946 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Serinc4Q5XK03 492 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Fzd7Q61090 572 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Brinp2Q6DFY8 783 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Rfx4Q7TNK1 735 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Fbxo2Q80UW2 297 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Mrps7Q80X85 242 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Snx32Q80ZJ7 404 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Lrrc8dQ8BGR2 859 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 TiparpQ8C1B2 657 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Grsf1Q8C5Q4 479 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Ppwd1Q8CEC6 646 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Vmn1r189Q8K3N3 312 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Kctd11Q8K485 232 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Wfikkn1Q8R0S6 552 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Olfr935Q8VG16 308 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Rabep2Q91WG2 554 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Akr1c21Q91WR5 323 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Chrm5Q920H4 532 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 DhddsQ99KU1 333 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gmpr2Q99L27 348 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 4930553M12RikQ9CUH1 165 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Pinx1Q9CZX5 332 aaKnown RBP13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Kat8Q9D1P2 458 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 9230112D13RikQ9D260 137 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Popdc3Q9ES81 291 aa13.76□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Tns1E9Q0S6 1888 aaKnown RBP13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm8765B7ZWJ3 1017 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Vmn2r125D3Z3M1 369 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm19345G3UYD9 124 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm20441G3UYJ7 252 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Trim55G3X8Y1 545 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Tmem200cJ3QK46 637 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Fmo6J3QMN6 532 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 FkbplO35450 347 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Nfkbil1O88995 381 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 AprtP08030 180 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gstm2P15626 218 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Mbl1P39039 239 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Stt3aP46978 705 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Hsd17b3P70385 305 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Cct3P80318 545 aaKnown RBP13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Ccdc69Q3TCJ8 202 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm906Q3V0M1 1017 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Serpinb1cQ5SV42 375 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Thoc6Q5U4D9 341 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 ClpbQ60649 677 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Prg2Q61878 223 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Samd4bQ80XS6 687 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Prr5Q812A5 387 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Dcaf12Q8BGZ3 453 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Cdcp2Q8BQH6 427 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Fam69cQ8BQT2 410 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Rbms3Q8BWL5 431 aaKnown RBP13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Yod1Q8CB27 343 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Lin28aQ8K3Y3 209 aaKnown RBP13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Bloc1s5Q8R015 185 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Olfr881Q8VF63 314 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Olfr583Q8VG25 319 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Nkx6-1Q99MA9 365 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 MrgprhQ99MT8 321 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Bex4Q9CWT2 118 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 CenpnQ9CZW2 337 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Dcdc2cQ9D1B8 347 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Cthrc1Q9D1D6 245 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Erp27Q9D8U3 272 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Ap3m1Q9JKC8 418 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Sema4gQ9WUH7 837 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Plek2Q9WV52 353 aa13.75□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gm6880A3KG45 208 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Chrna10B2RX82 447 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Kbtbd7G5E8C2 690 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 1700014D04RikJ3QMS2 983 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 2410141K09RikK7N769 464 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 PrkcshO08795 521 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Cx3cl1O35188 395 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Tpst1O70281 370 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 ArafP04627 604 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Dpy19l2P0CW70 773 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 GypaP14220 168 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Pmp22P16646 161 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Sox18P43680 377 aa13.74□□□□□ -0.21
Ercc1-201ENSMUST00000003645 Gpx3P46412 226 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms