RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SCAMP1O15126 338 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 CAPN5O15484 640 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 GASTP01350 101 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 RPLP0P05388 317 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 ELAVL4P26378 380 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 CRISP1P54107 249 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF45Q02386 682 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 NFE2L1Q14494 772 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 DUSP7Q16829 419 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF404Q494X3 552 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 TJAP1Q5JTD0 557 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 MRM1Q6IN84 353 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 FRMPD2BQ6IN97 320 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 PNCKQ6P2M8 343 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 HMGN2P46Q86SG4 172 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 LYSMD2Q8IV50 215 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 HORMAD2Q8N7B1 307 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 FAM181AQ8N9Y4 354 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF740Q8NDX6 193 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 OTULINQ96BN8 352 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 CHFRQ96EP1 664 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 SCARF2Q96GP6 870 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF354BQ96LW1 612 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 TPK1Q9H3S4 243 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 NMNAT1Q9HAN9 279 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 CTPS2Q9NRF8 586 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 SRPK3Q9UPE1 567 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 MGAT4BQ9UQ53 548 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 MUC6Q6W4X9 2439 aa6.78□□□□□ -1.32
CTNNA1-244ENST00000627109 FAAHO00519 579 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 MMP20O60882 483 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 EPPINO95925 133 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PTHP01270 115 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OSMP13725 252 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 FCARP24071 287 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 GADD45AP24522 165 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TRIM23P36406 574 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TSPAN7P41732 249 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 HYAL2Q12891 473 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 HSPB3Q12988 150 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC13A2Q13183 592 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SEC23BQ15437 767 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 FNDC3BQ53EP0 1204 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PLAG1Q6DJT9 500 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TCTN3Q6NUS6 607 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 DEF8Q6ZN54 512 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 GDPGP1Q6ZNW5 385 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CCDC190Q86UF4 302 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CAMKK1Q8N5S9 505 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PSD4Q8NDX1 1056 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 B3GNT7Q8NFL0 401 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OR9Q2Q8NGE9 314 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SFXN5Q8TD22 340 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 RASSF5Q8WWW0 418 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 ZBTB20Q9HC78 741 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 C11orf16Q9NQ32 467 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 AHSPQ9NZD4 102 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 LRFN1Q9P244 771 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC6A14Q9UN76 642 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 IGKV1-8A0A0C4DH67 115 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TRBC2A0A5B9 178 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CLEC3AO75596 197 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 GADD45GO95257 159 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SOX14O95416 240 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 STSP08842 583 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CXCR2P25025 360 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TIE1P35590 1138 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 P2RY2P41231 377 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC6A11P48066 632 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PCYT1AP49585 367 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 MAN2A2P49641 1150 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SSX1Q16384 188 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 INAVAQ3KP66 663 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PTCHD4Q6ZW05 846 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC22A16Q86VW1 577 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 GATAD2AQ86YP4 633 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 MMP21Q8N119 569 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SUN5Q8TC36 379 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OTUB1Q96FW1 271 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TRNT1Q96Q11 434 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SORBS1Q9BX66 1292 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 NLNQ9BYT8 704 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 GPR83Q9NYM4 423 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 NTMQ9P121 344 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 THAP10Q9P2Z0 257 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SLC23A2Q9UGH3 650 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 A4GNTQ9UNA3 340 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 IFT52Q9Y366 437 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CACNA1IQ9P0X4 2223 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SEC14L5O43304 696 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 OR10H3O60404 316 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 CYP7B1O75881 506 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 PDE9AO76083 593 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 IFNW1P05000 195 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 SCG5P05408 212 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 DRD2P14416 443 aa6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 TSFMP43897 325 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-244ENST00000627109 UGT2B15P54855 530 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms