RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CLCNKAP51800 687 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 COX10Q12887 443 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 HNRNPA0Q13151 305 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 GPR50Q13585 617 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF234Q14588 700 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF750Q32MQ0 723 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 OR2G6Q5TZ20 316 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 C1orf53Q5VUE5 145 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 METRNLQ641Q3 311 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF544Q6NX49 715 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF793Q6ZN11 406 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 FAM20CQ8IXL6 584 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 OR6F1Q8NGZ6 308 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 SETD6Q8TBK2 473 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 PLA2G12AQ9BZM1 189 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 SRRQ9GZT4 340 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 AICDAQ9GZX7 198 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 EGLN3Q9H6Z9 239 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 DDX31Q9H8H2 851 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 ABCB9Q9NP78 766 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 TESQ9UGI8 421 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF221Q9UK13 617 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 MRPS23Q9Y3D9 190 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 TCF20Q9UGU0 1960 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 IQCMA0A1B0GVH7 501 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 A0A1W2PQ09 198 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ERAL1O75616 437 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 RPN2P04844 631 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 IL7P13232 177 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CSNK1G2P78368 415 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CDK5Q00535 292 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ZNF517Q6ZMY9 492 aaPredicted RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 IL17RCQ8NAC3 791 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 MORN4Q8NDC4 146 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 SLC25A46Q96AG3 418 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 WDFY2Q96P53 400 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 KLHL31Q9H511 634 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 XKR8Q9H6D3 395 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 PCDHGB2Q9Y5G2 931 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 A0A0A6YYD5 115 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 KIAA0355O15063 1070 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 MSL3P1P0C860 447 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 TCEA1P23193 301 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 HSD17B2P37059 387 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CDK3Q00526 305 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 FUT5Q11128 374 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 MADCAM1Q13477 382 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 LASP1Q14847 261 aaKnown RBP10.62□□□□□ -0.71
VARS2-213ENST00000625423 MLC1Q15049 377 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 ATAD3CQ5T2N8 411 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 C1orf94Q6P1W5 598 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 FAM131AQ6UXB0 335 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CD300LDQ6UXZ3 194 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 KIF18BQ86Y91 864 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 PCBD2Q9H0N5 130 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 NPAP1Q9NZP6 1156 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 DEC1Q9P2X7 70 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 GPR52Q9Y2T5 361 aa10.62□□□□□ -0.71
VARS2-213ENST00000625423 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 IGKV1-8A0A0C4DH67 115 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 IGLON5A6NGN9 336 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 LATO43561 262 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 TSPAN19P0C672 248 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 SLC35G4P0C7Q5 338 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 CPEP16870 476 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 DAB2P98082 770 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 ADAMTSL4Q6UY14 1074 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 GATAD2AQ86YP4 633 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 GATAD2BQ8WXI9 593 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 FERD3LQ96RJ6 166 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 MIXL1Q9H2W2 232 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 C11orf49Q9H6J7 331 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 TAS2R7Q9NYW3 318 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 PLEKHB1Q9UF11 243 aaPredicted RBP10.61□□□□□ -0.71
VARS2-213ENST00000625423 ADAM29Q9UKF5 820 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 N6AMT1Q9Y5N5 214 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 CKAP5Q14008 2032 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 COL4A3Q01955 1670 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 A0A1W2PQL4 384 aaPredicted RBP10.61□□□□□ -0.71
VARS2-213ENST00000625423 LRIT2A6NDA9 550 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 A8MV72 311 aaPredicted RBP10.61□□□□□ -0.71
VARS2-213ENST00000625423 TFECO14948 347 aaPredicted RBP10.61□□□□□ -0.71
VARS2-213ENST00000625423 NTN1O95631 604 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 LGI1O95970 557 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 IL1AP01583 271 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 FGBP02675 491 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 HMGN2P05204 90 aaKnown RBP10.61□□□□□ -0.71
VARS2-213ENST00000625423 MYL12AP19105 171 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 SDC2P34741 201 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 CTNNB1P35222 781 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 KHKP50053 298 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 SMSP52788 366 aa10.61□□□□□ -0.71
VARS2-213ENST00000625423 RPS25P62851 125 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms