RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RCAN2Q14206 197 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
SMN1-211ENST00000625245 NNATQ16517 81 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 TIGD3Q6B0B8 471 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 KLC3Q6P597 504 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 L3MBTL4Q8NA19 623 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 OR1J4Q8NGS1 313 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 FBXO25Q8TCJ0 367 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 MBD6Q96DN6 1003 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 TMEM41AQ96HV5 264 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 YIPF4Q9BSR8 244 aa17.32■□□□□ 0.36
SMN1-211ENST00000625245 NXF5Q9H1B4 397 aaKnown RBP17.32■□□□□ 0.36
SMN1-211ENST00000625245 UTP11Q9Y3A2 253 aaKnown RBP17.32■□□□□ 0.36
SMN1-211ENST00000625245 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
SMN1-211ENST00000625245 FLNAP21333 2647 aaKnown RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 A0A096LPK6 155 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 C2orf72A6NCS6 295 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 MBD3L4A6NDZ8 208 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 MBD3L3A6NE82 208 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 MBD3L5A6NJ08 208 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 SEMA3DO95025 777 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 KLHL2O95198 593 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 ABCB1P08183 1280 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 CYP4B1P13584 511 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CPMP14384 443 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CCNG1P51959 295 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 NAGLUP54802 743 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CAV1Q03135 178 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 TRADDQ15628 312 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 NHSL2Q5HYW2 709 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CCNYL2Q5T2Q4 361 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 DESI1Q6ICB0 168 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CCDC91Q7Z6B0 441 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 MMP21Q8N119 569 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 C9orf106Q8NAJ2 232 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 FAM83FQ8NEG4 500 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 OR7G1Q8NGA0 311 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 MBD3L2Q8NHZ7 208 aaPredicted RBP17.31■□□□□ 0.36
SMN1-211ENST00000625245 BRINP2Q9C0B6 783 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CALHM2Q9HA72 323 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 AHSPQ9NZD4 102 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 BCAP29Q9UHQ4 241 aa17.31■□□□□ 0.36
SMN1-211ENST00000625245 CCDC189A1A4V9 331 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 PPM1BO75688 479 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 ATE1O95260 518 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 TMIGD3P0DMS9 266 aaPredicted RBP17.3■□□□□ 0.36
SMN1-211ENST00000625245 DRD2P14416 443 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 FOSL1P15407 271 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 PORP16435 677 aaPredicted RBP17.3■□□□□ 0.36
SMN1-211ENST00000625245 GPX3P22352 226 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 PTPN6P29350 595 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 TYK2P29597 1187 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 GCKP35557 465 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
SMN1-211ENST00000625245 SRYQ05066 204 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 POU4F3Q15319 338 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 DEFB113Q30KQ7 82 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 SGO1Q5FBB7 561 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 FAM111BQ6SJ93 734 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 PTGR2Q8N8N7 351 aaPredicted RBP17.3■□□□□ 0.36
SMN1-211ENST00000625245 C17orf47Q8NEP4 570 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 OR52B6Q8NGF0 335 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
SMN1-211ENST00000625245 VPS11Q9H270 941 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 DLL4Q9NR61 685 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 DTX4Q9Y2E6 619 aa17.3■□□□□ 0.36
SMN1-211ENST00000625245 MED12LQ86YW9 2145 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 HMX2A2RU54 273 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 CLCA1A8K7I4 914 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 OR7A17O14581 309 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 CDH16O75309 829 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 ERN1O75460 977 aaKnown RBP17.29■□□□□ 0.36
SMN1-211ENST00000625245 ACTL6AO96019 429 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 S1PR1P21453 382 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 EXOSC7Q15024 291 aaKnown RBP17.29■□□□□ 0.36
SMN1-211ENST00000625245 FRG2Q64ET8 278 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 PAGE2Q7Z2X7 111 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 WFDC11Q8NEX6 87 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 RDH11Q8TC12 318 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 ZPLD1Q8TCW7 415 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 PHF21BQ96EK2 531 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 GPR78Q96P69 363 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 FRG2BQ96QU4 278 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 NODALQ96S42 347 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 RBM24Q9BX46 236 aaKnown RBP17.29■□□□□ 0.36
SMN1-211ENST00000625245 RAB17Q9H0T7 212 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 SERHLQ9NQF3 203 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 KLRF1Q9NZS2 232 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 MAPRE3Q9UPY8 281 aa17.29■□□□□ 0.36
SMN1-211ENST00000625245 RPH3AQ9Y2J0 694 aaPredicted RBP17.29■□□□□ 0.36
SMN1-211ENST00000625245 H0Y3Z8 333 aa17.28■□□□□ 0.36
SMN1-211ENST00000625245 ICOSLGO75144 302 aa17.28■□□□□ 0.36
SMN1-211ENST00000625245 ERAL1O75616 437 aaKnown RBP17.28■□□□□ 0.36
SMN1-211ENST00000625245 IL18BPO95998 194 aa17.28■□□□□ 0.36
SMN1-211ENST00000625245 NAGAP17050 411 aa17.28■□□□□ 0.36
SMN1-211ENST00000625245 CNTFP26441 200 aa17.28■□□□□ 0.36
SMN1-211ENST00000625245 SOX18P35713 384 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms