RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PTGS2P35354 604 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
TCF4-248ENST00000616053 PIP5K1AQ99755 562 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 OR10A5Q9H207 317 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 RXFP3Q9NSD7 469 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 ATP23Q9Y6H3 246 aa12.09□□□□□ -0.47
TCF4-248ENST00000616053 LEFTY2O00292 366 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 BCAS2O75934 225 aaPredicted RBP12.08□□□□□ -0.47
TCF4-248ENST00000616053 GBAP04062 536 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 AGTR1P30556 359 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 CSN1S1P47710 185 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 CDKN3Q16667 212 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 DEFB134Q4QY38 66 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 ZNF761Q86XN6 746 aaPredicted RBP12.08□□□□□ -0.47
TCF4-248ENST00000616053 NUP37Q8NFH4 326 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.47
TCF4-248ENST00000616053 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.47
TCF4-248ENST00000616053 GRPRP30550 384 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 KCNC4Q03721 635 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TLE4Q04727 773 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 OBP2AQ9NY56 170 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 LIASO43766 372 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 PROS1P07225 676 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SERPINA6P08185 405 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ADH4P08319 380 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 LIMK2P53671 638 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SHISA6Q6ZSJ9 500 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 OR5B17Q8NGF7 314 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 RNF128Q8TEB7 428 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SEMA4CQ9C0C4 833 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ERVK13-1Q9NX77 482 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MGAT4BQ9UQ53 548 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SDK1Q7Z5N4 2213 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 MRPL33O75394 65 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 CRTAPO75718 401 aaPredicted RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 AFF3P51826 1226 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 Q1RN00 199 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 NT5DC1Q5TFE4 455 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 LINC00696Q6ZRV3 163 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 LARP4Q71RC2 724 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCF4-248ENST00000616053 MAMDC2Q7Z304 686 aaPredicted RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 NAA40Q86UY6 237 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCF4-248ENST00000616053 RAB7BQ96AH8 199 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SPIN2AQ99865 258 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SPIN2BQ9BPZ2 258 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 CWH43Q9H720 699 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 FN3KRPQ9HA64 309 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TNFRSF19Q9NS68 423 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 P4HTMQ9NXG6 502 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SPAG17Q6Q759 2223 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TTC3P53804 2025 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 OPN1SWP03999 348 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ZNF182P17025 639 aaPredicted RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 TAS2R20P59543 309 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MEX3BQ6ZN04 569 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 FAM109AQ8N4B1 249 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 CSNK2A3Q8NEV1 391 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 CDC6Q99741 560 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 PNPOQ9NVS9 261 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TISP43B9A030 160 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 H7BY64 318 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TGM4P49221 684 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MTPNP58546 118 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 RPA4Q13156 261 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 FBXO43Q4G163 708 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 HEPHL1Q6MZM0 1159 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 RBM44Q6ZP01 1051 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 LGI4Q8N135 537 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 PRAP1Q96NZ9 151 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 TM7SF3Q9NS93 570 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
TCF4-248ENST00000616053 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 H0YAE9 185 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 SYT7O43581 403 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ECI2O75521 394 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 RBBP9O75884 186 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 CPT2P23786 658 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 FOLH1Q04609 750 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ZNF460Q14592 562 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 MKXQ8IYA7 352 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 OR5P2Q8WZ92 322 aa12.08□□□□□ -0.48
TCF4-248ENST00000616053 ESAMQ96AP7 390 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms