RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ACAP2Q15057 778 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 FAM83EQ2M2I3 478 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 DEFB113Q30KQ7 82 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 MROH9Q5TGP6 573 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 FBXW10Q5XX13 1052 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 TIGD3Q6B0B8 471 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 ZDHHC24Q6UX98 284 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 ANGPTL8Q6UXH0 198 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 YRDCQ86U90 279 aaKnown RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 FAM83FQ8NEG4 500 aaPredicted RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 C17orf47Q8NEP4 570 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 WFDC11Q8NEX6 87 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 OR4K14Q8NGD5 310 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 OR52B6Q8NGF0 335 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 ABTB1Q969K4 478 aaPredicted RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 MRRFQ96E11 262 aaKnown RBP14.92□□□□□ -0.02
LIG1-205ENST00000593425 GPR78Q96P69 363 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 PLEKHF2Q9H8W4 249 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 EDARQ9UNE0 448 aa14.92□□□□□ -0.02
LIG1-205ENST00000593425 PPM1BO75688 479 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 KLHL2O95198 593 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 CLDN9O95484 217 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 CPMP14384 443 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 OPRM1P35372 400 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 PTGDSP41222 190 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 XKP51811 444 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 RPP38P78345 283 aaKnown RBP14.91□□□□□ -0.02
LIG1-205ENST00000593425 SORDQ00796 357 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 FOXF2Q12947 444 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 KEAP1Q14145 624 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 SF3B4Q15427 424 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIG1-205ENST00000593425 TECRLQ5HYJ1 363 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 FAM111BQ6SJ93 734 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 KIF18BQ86Y91 864 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 SIMC1Q8NDZ2 872 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 OR1J4Q8NGS1 313 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 HGDQ93099 445 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 NODALQ96S42 347 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 SERPINI1Q99574 410 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 ITPAQ9BY32 194 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 MRPL1Q9BYD6 325 aaKnown RBP14.91□□□□□ -0.02
LIG1-205ENST00000593425 NOL11Q9H8H0 719 aaKnown RBP14.91□□□□□ -0.02
LIG1-205ENST00000593425 METTL7AQ9H8H3 244 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 CALHM2Q9HA72 323 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 MPDZO75970 2070 aa14.91□□□□□ -0.02
LIG1-205ENST00000593425 ABCA4P78363 2273 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 A0A096LPK6 155 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 A0A1W2PPR1 153 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 CCDC189A1A4V9 331 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 C2orf72A6NCS6 295 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 CLCA1A8K7I4 914 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 IL18BPO95998 194 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 KLK1P06870 262 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 TMIGD3P0DMS9 266 aaPredicted RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 FOSL1P15407 271 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 KRT15P19012 456 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 GUCY2DQ02846 1103 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 MGAT2Q10469 447 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 TRAF3Q13114 568 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 EXOSC7Q15024 291 aaKnown RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 POU4F3Q15319 338 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 PRICKLE4Q2TBC4 344 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 C6orf163Q5TEZ5 329 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 FAM219BQ5XKK7 198 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 PLXDC2Q6UX71 529 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 CCDC91Q7Z6B0 441 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 PLD6Q8N2A8 252 aaKnown RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 PTGR2Q8N8N7 351 aaPredicted RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 OR7G1Q8NGA0 311 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 ZPLD1Q8TCW7 415 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 SMR3AQ99954 134 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 TUBA1CQ9BQE3 449 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 OSBPL11Q9BXB4 747 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 BRINP2Q9C0B6 783 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 GRPEL1Q9HAV7 217 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 GALNT9Q9HCQ5 603 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 PYCARDQ9ULZ3 195 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 MAPRE3Q9UPY8 281 aa14.9□□□□□ -0.02
LIG1-205ENST00000593425 TNPO3Q9Y5L0 923 aaKnown RBP14.9□□□□□ -0.02
LIG1-205ENST00000593425 VPS13CQ709C8 3753 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 SNPHO15079 494 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ICOSLGO75144 302 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ACTL6AO96019 429 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 ALDOAP04075 364 aaKnown RBP14.89□□□□□ -0.03
LIG1-205ENST00000593425 DRD2P14416 443 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 PORP16435 677 aaPredicted RBP14.89□□□□□ -0.03
LIG1-205ENST00000593425 CNTFP26441 200 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 CCNG1P51959 295 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 CAV1Q03135 178 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 DUSP2Q05923 314 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 RCAN2Q14206 197 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 UBAP2Q5T6F2 1119 aaKnown RBP14.89□□□□□ -0.03
LIG1-205ENST00000593425 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 TMEM81Q6P7N7 255 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 KRTAP1-3Q8IUG1 177 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 VWA5B2Q8N398 1253 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 SLC44A1Q8WWI5 657 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 OMA1Q96E52 524 aa14.89□□□□□ -0.03
LIG1-205ENST00000593425 NSUN5Q96P11 429 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms