RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PPM1NQ8N819 430 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 ZPLD1Q8TCW7 415 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 HGDQ93099 445 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 GPR78Q96P69 363 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 OR10A5Q9H207 317 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 PRM3Q9NNZ6 103 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
CCDC43-204ENST00000588687 SNPHO15079 494 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 OPRM1P35372 400 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 ALDH18A1P54886 795 aaKnown RBP16.78■□□□□ 0.28
CCDC43-204ENST00000588687 DCAF7P61962 342 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 LTBQ06643 244 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 MGAT2Q10469 447 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 KEAP1Q14145 624 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 PFKFB4Q16877 469 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 CXorf67Q86X51 503 aaPredicted RBP16.78■□□□□ 0.28
CCDC43-204ENST00000588687 ABTB1Q969K4 478 aaPredicted RBP16.78■□□□□ 0.28
CCDC43-204ENST00000588687 REPS1Q96D71 796 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 NAPGQ99747 312 aaPredicted RBP16.78■□□□□ 0.28
CCDC43-204ENST00000588687 WDR41Q9HAD4 459 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 GALNT8Q9NY28 637 aa16.78■□□□□ 0.28
CCDC43-204ENST00000588687 CCDC189A1A4V9 331 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 OR7A17O14581 309 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 GNB5O14775 395 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 RAD51CO43502 376 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 PPM1BO75688 479 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 SIX3O95343 332 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-204ENST00000588687 CPMP14384 443 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 CPN1P15169 458 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 PHEXP78562 749 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 CALCOCO2Q13137 446 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 GTF2H2Q13888 395 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC43-204ENST00000588687 NNATQ16517 81 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 GTF2H2CQ6P1K8 395 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 YRDCQ86U90 279 aaKnown RBP16.77■□□□□ 0.28
CCDC43-204ENST00000588687 SIMC1Q8NDZ2 872 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 OR7G1Q8NGA0 311 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 OR52B6Q8NGF0 335 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 FBF1Q8TES7 1133 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 C18orf12Q96KH6 178 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 UCN2Q96RP3 112 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 NODALQ96S42 347 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 TUBA1CQ9BQE3 449 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 IPPKQ9H8X2 491 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 GALNT9Q9HCQ5 603 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 CLCF1Q9UBD9 225 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 ZNF639Q9UID6 485 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 CES1P1Q9UKY3 287 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 ANGPTL3Q9Y5C1 460 aa16.77■□□□□ 0.28
CCDC43-204ENST00000588687 ANK3Q12955 4377 aaKnown RBP16.76■□□□□ 0.27
CCDC43-204ENST00000588687 FAM187AA6NFU0 413 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ACTL6AO96019 429 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 C2P06681 752 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 RHOXF2BP0C7M4 288 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 TMIGD3P0DMS9 266 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-204ENST00000588687 GFAPP14136 432 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 NAGAP17050 411 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 PIK3R1P27986 724 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 NRG3P56975 720 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 GNG11P61952 73 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 NAB1Q13506 487 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 PRICKLE4Q2TBC4 344 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 HLA-DQA1Q5Y7H0 255 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 PLXDC2Q6UX71 529 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ZDHHC24Q6UX98 284 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ANGPTL8Q6UXH0 198 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 WDSUB1Q8N9V3 476 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 SLC44A1Q8WWI5 657 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ARSGQ96EG1 525 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 DACH2Q96NX9 599 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 SFXN3Q9BWM7 321 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ITPAQ9BY32 194 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 OR2B2Q9GZK3 357 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 MAT2BQ9NZL9 334 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 ACOT9Q9Y305 439 aa16.76■□□□□ 0.27
CCDC43-204ENST00000588687 A0A087X1B8 175 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 B4DXG7 233 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 CDH16O75309 829 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 ATP1B1P05026 303 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 STX2P32856 288 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 XKP51811 444 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 GFRA1P56159 465 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 RPP38P78345 283 aaKnown RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 DUSP2Q05923 314 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 TRAF3Q13114 568 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 ACAP2Q15057 778 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 POU4F3Q15319 338 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 METTL2BQ6P1Q9 378 aaKnown RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 Q71RC1 249 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 CCDC91Q7Z6B0 441 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 VWA5B2Q8N398 1253 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 OR4K14Q8NGD5 310 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 OR1J4Q8NGS1 313 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 FBXO25Q8TCJ0 367 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 SMPDL3BQ92485 455 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms