RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 DEFB113Q30KQ7 82 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 FAM153CQ494X1 144 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 UBAP2Q5T6F2 1119 aaKnown RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 NSUN5P2Q63ZY6 315 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 FAM180BQ6P0A1 224 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 FAM111BQ6SJ93 734 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 CYP20A1Q6UW02 462 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 GOLGA7Q7Z5G4 137 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 KRTAP1-3Q8IUG1 177 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 LACC1Q8IV20 430 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 VWA5B2Q8N398 1253 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 WDR20Q8TBZ3 569 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 FBF1Q8TES7 1133 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 CAVIN3Q969G5 261 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ABTB1Q969K4 478 aaPredicted RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 MBD6Q96DN6 1003 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ALPK1Q96QP1 1244 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 NODALQ96S42 347 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 PRDM14Q9GZV8 571 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 OR10A5Q9H207 317 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ACTR8Q9H981 624 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 NMRAL1Q9HBL8 299 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ZNF629Q9UEG4 869 aaPredicted RBP10.61□□□□□ -0.71
LIG3-207ENST00000586119 C15orf41Q9Y2V0 281 aa10.61□□□□□ -0.71
LIG3-207ENST00000586119 ARID1AO14497 2285 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 A0A087WUV0 522 aaPredicted RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 OR6C76A6NM76 312 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 EEF1E1-BLOC1S5C9J1V9 151 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 OR7A17O14581 309 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 TP53I11O14683 189 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 CTIFO43310 598 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 EEF1E1O43324 174 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 NME6O75414 186 aaPredicted RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 RAF1P04049 648 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 C2P06681 752 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 ABCB1P08183 1280 aaPredicted RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 NT5EP21589 574 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 CTSSP25774 331 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 PTPN6P29350 595 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 SERPINB1P30740 379 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 MASP1P48740 699 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 STARP49675 285 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 DUSP2Q05923 314 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 LTBQ06643 244 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 FUT7Q11130 342 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 TBL3Q12788 808 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 GTF2H2Q13888 395 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 KEAP1Q14145 624 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 EXOSC7Q15024 291 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 SETDB1Q15047 1291 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 RPS6KA2Q15349 733 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 LIPJQ5W064 366 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 FBXW10Q5XX13 1052 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 GTF2H2CQ6P1K8 395 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 TBC1D1Q86TI0 1168 aaPredicted RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 TAGAPQ8N103 731 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 FAM83FQ8NEG4 500 aaPredicted RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 RDH11Q8TC12 318 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 TP53INP1Q96A56 240 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 GPR78Q96P69 363 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 NXF5Q9H1B4 397 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 ACSS3Q9H6R3 686 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 IPPKQ9H8X2 491 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 GALNT9Q9HCQ5 603 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
LIG3-207ENST00000586119 LYARQ9NX58 379 aaKnown RBP10.6□□□□□ -0.71
LIG3-207ENST00000586119 EHD3Q9NZN3 535 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 JKAMPQ9P055 326 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 FETUBQ9UGM5 382 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 ADGRE2Q9UHX3 823 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 ANGPTL3Q9Y5C1 460 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 PCDHGA11Q9Y5H2 935 aa10.6□□□□□ -0.71
LIG3-207ENST00000586119 A0A1B0GTL3 188 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
LIG3-207ENST00000586119 CD8B2A6NJW9 211 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 H0YIV9 168 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 RIPK2O43353 540 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 ERLIN1O75477 346 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 SNX4O95219 450 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 HRGP04196 525 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 KLK1P06870 262 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 GFAPP14136 432 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 GPX3P22352 226 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 PIK3R1P27986 724 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 ABCD3P28288 659 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 CRABP2P29373 138 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 HOXC12P31275 282 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 GALNSP34059 522 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 XKP51811 444 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 SRYQ05066 204 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 MGAT2Q10469 447 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 CUL3Q13618 768 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
LIG3-207ENST00000586119 TBCELQ5QJ74 424 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms