RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-206	ENST00000577578	EPS8L3	Q8TE67	593 aa	Known RBP	11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	KLHL29	Q96CT2	875 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ERP27	Q96DN0	273 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	APIP	Q96GX9	242 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SHCBP1L	Q9BZQ2	653 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	MID1IP1	Q9NPA3	183 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ZFP64	Q9NPA5	681 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ACKR4	Q9NPB9	350 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	OXSM	Q9NWU1	459 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	QPCTL	Q9NXS2	382 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	EHD3	Q9NZN3	535 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	BOK	Q9UMX3	212 aa	Predicted RBP	11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	CFL2	Q9Y281	166 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	DTX4	Q9Y2E6	619 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TIMM22	Q9Y584	194 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NPFFR2	Q9Y5X5	522 aa		11.44	□□□□□ -0.58
CSNK1D-206	ENST00000577578	POLQ	O75417	2590 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NPIPB8	E9PQR5	432 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TP53I11	O14683	189 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	BCKDK	O14874	412 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	HCN1	O60741	890 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TRIM3	O75382	744 aa	Predicted RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ERAL1	O75616	437 aa	Known RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	CBX7	O95931	251 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	IL3	P08700	152 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NUDT17	P0C025	328 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	RFPL3S	P0C7P2	107 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PRF1	P14222	555 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	KRT4	P19013	534 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ENDOU	P21128	410 aa	Known RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ABCD3	P28288	659 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PTGER4	P35408	488 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TMED10	P49755	219 aa	Known RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NAGLU	P54802	743 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SLC10A1	Q14973	349 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	GXYLT1	Q4G148	440 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ZNF628	Q5EBL2	1059 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	C6orf163	Q5TEZ5	329 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PRAMEF20	Q5VT98	475 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	HLA-DQA1	Q5Y7H0	255 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TMEM81	Q6P7N7	255 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FAM111B	Q6SJ93	734 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TMEM64	Q6YI46	380 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	CCNYL1	Q8N7R7	359 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-6	■■□□□ 14.1
CSNK1D-206	ENST00000577578	SPPL2A	Q8TCT8	520 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SMC6	Q96SB8	1091 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ANGPTL4	Q9BY76	406 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NXF5	Q9H1B4	397 aa	Known RBP	11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	MKS1	Q9NXB0	559 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	UTS2R	Q9UKP6	389 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	DLGAP4	Q9Y2H0	992 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PCDHGB3	Q9Y5G1	929 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ZNF780B	Q9Y6R6	833 aa		11.43	□□□□□ -0.58
CSNK1D-206	ENST00000577578	OTOG	Q6ZRI0	2925 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ATP6AP2	A0A1C7CYW4	349 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	GNG14	A0A1W2PPG7	69 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NPIPA2	E9PIF3	369 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NPIPA3	F8WFD2	350 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	T	O15178	435 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ACOX3	O15254	700 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ATP6AP2	O75787	350 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SNX4	O95219	450 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	CPA3	P15088	417 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	DRD5	P21918	477 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ALDH9A1	P49189	494 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	EMD	P50402	254 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	NRG3	P56975	720 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FBXW4	P57775	412 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	HEPACAM	Q14CZ8	416 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	LTB4R	Q15722	352 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TRMT12	Q53H54	448 aa	Known RBP	11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FNDC7	Q5VTL7	733 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TMEM211	Q6ICI0	200 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FAM180B	Q6P0A1	224 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	RIBC1	Q8N443	379 aa	Predicted RBP	11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	RPRML	Q8N4K4	120 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SIMC1	Q8NDZ2	872 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	ADCY4	Q8NFM4	1077 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FAM76A	Q8TAV0	307 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	C16orf78	Q8WTQ4	265 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	DIO2	Q92813	273 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	HSPBAP1	Q96EW2	488 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	METTL2A	Q96IZ6	378 aa	Known RBP	11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TREX2	Q9BQ50	279 aa	Predicted RBP	11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	DOHH	Q9BU89	302 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	BRINP2	Q9C0B6	783 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	UBQLN3	Q9H347	655 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	RUBCNL	Q9H714	662 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TNFRSF12A	Q9NP84	129 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PNPLA3	Q9NST1	481 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TAS2R7	Q9NYW3	318 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	COQ3	Q9NZJ6	369 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	WBP11	Q9Y2W2	641 aa	Known RBP	11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	PLLP	Q9Y342	182 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	CCL27	Q9Y4X3	112 aa		11.42	□□□□□ -0.58
CSNK1D-206	ENST00000577578	TRGV5	A0A0B4J1U4	118 aa		11.41	□□□□□ -0.58
CSNK1D-206	ENST00000577578	SMIM23	A6NLE4	172 aa		11.41	□□□□□ -0.58
CSNK1D-206	ENST00000577578	FIGNL2	A6NMB9	653 aa		11.41	□□□□□ -0.58

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