RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PHEXP78562 749 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 POU4F1Q01851 419 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 FUT7Q11130 342 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ETFDHQ16134 617 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 MSS51Q4VC12 460 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 PRAMEF9Q5VWM5 478 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 C18orf63Q68DL7 685 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CYP20A1Q6UW02 462 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 IFNEQ86WN2 208 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 IGDCC3Q8IVU1 814 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ADIPOR1Q96A54 375 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 REPS1Q96D71 796 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 STARD4Q96DR4 205 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CFAP36Q96G28 342 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CD244Q9BZW8 370 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 OR2B2Q9GZK3 357 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 OR10A5Q9H207 317 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 OR51B5Q9H339 312 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CXorf21Q9HAI6 301 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CD274Q9NZQ7 290 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 MAPRE3Q9UPY8 281 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ANK3Q12955 4377 aaKnown RBP8.17□□□□□ -1.1
SMG6-218ENST00000575454 SLC22A20A6NK97 555 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PGRMC1O00264 195 aaKnown RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 PLOD2O00469 737 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PLPP1O14494 284 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 DNALI1O14645 258 aaPredicted RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 SIAH2O43255 324 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 HCRTR2O43614 444 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 TLX2O43763 284 aaPredicted RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 ICOSLGO75144 302 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 SH3BGRLO75368 114 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 BANF1O75531 89 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 FAM58BPP0C7Q3 252 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PPP3CBP16298 524 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PIK3R1P27986 724 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 SSTR4P31391 388 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 SOX18P35713 384 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 GMPRP36959 345 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 ELK3P41970 407 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 ATP5J2P56134 94 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 GFRA1P56159 465 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 ZNF460Q14592 562 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 BEX5Q5H9J7 111 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 STEAP4Q687X5 459 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 OR52E8Q6IFG1 317 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 SH2D5Q6ZV89 423 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PLCZ1Q86YW0 608 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 ZNF615Q8N8J6 731 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 GBP7Q8N8V2 638 aaPredicted RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 CNEP1R1Q8N9A8 125 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PDPRQ8NCN5 879 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 HUS1BQ8NHY5 278 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 DOK4Q8TEW6 326 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 CTHRC1Q96CG8 243 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 TMCO6Q96DC7 493 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PGM2Q96G03 612 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 SFXN2Q96NB2 322 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 OSBPL11Q9BXB4 747 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 RHOJQ9H4E5 214 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 DDX31Q9H8H2 851 aaKnown RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 PLAC1Q9HBJ0 212 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 FANCFQ9NPI8 374 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 SERHLQ9NQF3 203 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PSD3Q9NYI0 1048 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 KLRF1Q9NZS2 232 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
SMG6-218ENST00000575454 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 ASB4Q9Y574 426 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
SMG6-218ENST00000575454 PHF3Q92576 2039 aaKnown RBP8.15□□□□□ -1.1
SMG6-218ENST00000575454 A0A1W2PR48 441 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 LRRC14BA6NHZ5 514 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 GLOD5A6NK44 160 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 K7EPI3 171 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 EMC8O43402 210 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 ABCB7O75027 752 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
SMG6-218ENST00000575454 CCDC166P0CW27 439 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 CD8BP10966 210 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 EPB42P16452 691 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 ZNF708P17019 499 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 EPORP19235 508 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 CDC25BP30305 580 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 SRD5A2P31213 254 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 LHX2P50458 406 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 HNRNPH2P55795 449 aaKnown RBP8.15□□□□□ -1.1
SMG6-218ENST00000575454 ARL4CP56559 192 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 PSPHP78330 225 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 PLCXD2Q0VAA5 305 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 TNK1Q13470 666 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 CUL3Q13618 768 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 DDX39BQ13838 428 aaKnown RBP8.15□□□□□ -1.1
SMG6-218ENST00000575454 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
SMG6-218ENST00000575454 MRM1Q6IN84 353 aaKnown RBP8.15□□□□□ -1.1
SMG6-218ENST00000575454 GRHL2Q6ISB3 625 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms