RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MBD3L3A6NE82 208 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 MBD3L5A6NJ08 208 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 OR7A17O14581 309 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 SNX4O95219 450 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 EPXP11678 715 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 CPMP14384 443 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 DRD2P14416 443 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 ABCD3P28288 659 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 PTPN6P29350 595 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 XKP51811 444 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 ALDH18A1P54886 795 aaKnown RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 NRG3P56975 720 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 FOXF2Q12947 444 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 KEAP1Q14145 624 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 EXOSC7Q15024 291 aaKnown RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 PCBP2Q15366 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
NME3-211ENST00000568561 UAP1Q16222 522 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 FAM83EQ2M2I3 478 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 TIGD3Q6B0B8 471 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 ZDHHC24Q6UX98 284 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 L3MBTL4Q8NA19 623 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 FAM83FQ8NEG4 500 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 SPATA4Q8NEY3 305 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 MBD3L2Q8NHZ7 208 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 ABTB1Q969K4 478 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 MBD6Q96DN6 1003 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 TMEM41AQ96HV5 264 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 ITPAQ9BY32 194 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 NOL11Q9H8H0 719 aaKnown RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
NME3-211ENST00000568561 PYCARDQ9ULZ3 195 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 MAPRE3Q9UPY8 281 aa14.16□□□□□ -0.14
NME3-211ENST00000568561 A0A096LPK6 155 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 CD8B2A6NJW9 211 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 UGDHO60701 494 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 KLK1P06870 262 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 ABCB1P08183 1280 aaPredicted RBP14.15□□□□□ -0.14
NME3-211ENST00000568561 KRT15P19012 456 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 CTSSP25774 331 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 CNTFP26441 200 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 DEFB113Q30KQ7 82 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 SGO1Q5FBB7 561 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 NHSL2Q5HYW2 709 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 UBAP2Q5T6F2 1119 aaKnown RBP14.15□□□□□ -0.14
NME3-211ENST00000568561 C6orf163Q5TEZ5 329 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 FAM111BQ6SJ93 734 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 KIF18BQ86Y91 864 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 PTGR2Q8N8N7 351 aaPredicted RBP14.15□□□□□ -0.14
NME3-211ENST00000568561 OR4K14Q8NGD5 310 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 OR1J4Q8NGS1 313 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 RDH11Q8TC12 318 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 NSUN5Q96P11 429 aaKnown RBP14.15□□□□□ -0.14
NME3-211ENST00000568561 GPR78Q96P69 363 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 NODALQ96S42 347 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 SECISBP2Q96T21 854 aaKnown RBP14.15□□□□□ -0.14
NME3-211ENST00000568561 SERPINI1Q99574 410 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 TUBA1CQ9BQE3 449 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 YIPF4Q9BSR8 244 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 BRINP2Q9C0B6 783 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 PLEKHF2Q9H8W4 249 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 SERHLQ9NQF3 203 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 EDARQ9UNE0 448 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 IKBKGQ9Y6K9 419 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 TLN2Q9Y4G6 2542 aa14.15□□□□□ -0.14
NME3-211ENST00000568561 A0A1W2PPR1 153 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 CLCA1A8K7I4 914 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 FOXE1O00358 373 aaPredicted RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 PPM1BO75688 479 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 SEMA3DO95025 777 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 KLHL2O95198 593 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 CLDN9O95484 217 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 TMIGD3P0DMS9 266 aaPredicted RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 S1PR1P21453 382 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 FEN1P39748 380 aaKnown RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 RPP38P78345 283 aaKnown RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 SRYQ05066 204 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 DUSP2Q05923 314 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 NAB1Q13506 487 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 RCAN2Q14206 197 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 ACAP2Q15057 778 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 TECRLQ5HYJ1 363 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 FAM180BQ6P0A1 224 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 RPS27LQ71UM5 84 aaKnown RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 CAMKMTQ7Z624 323 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 LUZP2Q86TE4 346 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 GCNT2Q8N0V5 402 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 PLD6Q8N2A8 252 aaKnown RBP14.14□□□□□ -0.15
NME3-211ENST00000568561 VWA5B2Q8N398 1253 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 ADCY4Q8NFM4 1077 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 SLC44A1Q8WWI5 657 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 HGDQ93099 445 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 ATP6V1E2Q96A05 226 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 NTNG2Q96CW9 530 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 OMA1Q96E52 524 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 PHF21BQ96EK2 531 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 OSBPL11Q9BXB4 747 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 VPS11Q9H270 941 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 GALNT8Q9NY28 637 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 KLRF1Q9NZS2 232 aa14.14□□□□□ -0.15
NME3-211ENST00000568561 JKAMPQ9P055 326 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms