RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 USP34Q70CQ2 3546 aa1.26□□□□□ -2.21
SMG1-212ENST00000566328 KIAA0100Q14667 2235 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 AK9Q5TCS8 1911 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 KIF13BQ9NQT8 1826 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ARFGEF1Q9Y6D6 1849 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 hCG_1809904A0A1W2PP81 198 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 A0A1W2PPE2 198 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 A0A1W2PPW3 197 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 A0A1W2PR64 198 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD18BA2A2Z9 1011 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 SERPINE3A8MV23 424 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 SERF1AO75920 110 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 GJB5O95377 273 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 FCGR3AP08637 254 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 KRT3P12035 628 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ZNF44P15621 663 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 HMGB2P26583 209 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 SSTR1P30872 391 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 HOXD13P35453 343 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 CSE1LP55060 971 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 PFN3P60673 137 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 PSMC6P62333 389 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 CD47Q08722 323 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ACSM1Q08AH1 577 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 TFCP2Q12800 502 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ASAH1Q13510 395 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 MPPED2Q15777 294 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 TAZQ16635 292 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 CCDC57Q2TAC2 916 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 LETM2Q2VYF4 491 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 HSP90AB3PQ58FF7 597 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 RILPL1Q5EBL4 403 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ARMC4Q5T2S8 1044 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 CCDC70Q6NSX1 233 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 APOBEC3HQ6NTF7 200 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 CDC42EP5Q6NZY7 148 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 TGIF2LYQ8IUE0 185 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 CROCCP3Q8IVE0 287 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 TPRX1Q8N7U7 411 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 SNRNP27Q8WVK2 155 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 SPSB1Q96BD6 273 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ZBED3Q96IU2 234 aaPredicted RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 GCNAQ96QF7 691 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 NMUR2Q9GZQ4 415 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 MAF1Q9H063 256 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 DEFB129Q9H1M3 183 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 FN3KQ9H479 309 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 DPEP3Q9H4B8 488 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ZNF282Q9UDV7 671 aaPredicted RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 RUVBL2Q9Y230 463 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 RGPD3A6NKT7 1758 aaPredicted RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 RGPD4Q7Z3J3 1758 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 QSER1Q2KHR3 1735 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD26Q9UPS8 1709 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 DMDP11532 3685 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 TNRC6CQ9HCJ0 1690 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 CHD7Q9P2D1 2997 aa1.25□□□□□ -2.21
SMG1-212ENST00000566328 DICER1Q9UPY3 1922 aaKnown RBP1.25□□□□□ -2.21
SMG1-212ENST00000566328 VPS13AQ96RL7 3174 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 LAMB2P55268 1798 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 UBR2Q8IWV8 1755 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 CNTNAP1P78357 1384 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 OR5H15A6NDH6 313 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 A8MX80 341 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 B4DXG7 233 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 PRKAB2O43741 272 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 SURF6O75683 361 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 SNRPCP09234 159 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 SLC35E2P0CK97 266 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 EEF2P13639 858 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 PAX3P23760 479 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 EFNA3P52797 238 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 GEMIN4P57678 1058 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 DYNLL1P63167 89 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 MAP2K1Q02750 393 aaPredicted RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 CALD1Q05682 793 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 STK4Q13043 487 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 IL17AQ16552 155 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 QRICH1Q2TAL8 776 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 ANKRD55Q3KP44 614 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 PLPP4Q5VZY2 271 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 MOXD1Q6UVY6 613 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 ZNF589Q86UQ0 364 aaPredicted RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 ZNF677Q86XU0 584 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 Q8N9G6 341 aaPredicted RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 CD99L2Q8TCZ2 262 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 PHF10Q8WUB8 498 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 SMPDL3AQ92484 453 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 OPTNQ96CV9 577 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 HDAC11Q96DB2 347 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 SPATA33Q96N06 139 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 GTPBP2Q9BX10 602 aaKnown RBP1.24□□□□□ -2.21
SMG1-212ENST00000566328 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 COA1Q9GZY4 146 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 MYH16Q9H6N6 1097 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 VIPAS39Q9H9C1 493 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 IL1RAPL2Q9NP60 686 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 TIGARQ9NQ88 270 aa1.24□□□□□ -2.21
SMG1-212ENST00000566328 HPS4Q9NQG7 708 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms