RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TBCCQ15814 346 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 PAGE2BQ5JRK9 111 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 ZNF678Q5SXM1 525 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 NSUN5P2Q63ZY6 315 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 GOLGA7Q7Z5G4 137 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 LUZP2Q86TE4 346 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 KRT78Q8N1N4 520 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 ATP6V1E2Q96A05 226 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 TLCD1Q96CP7 247 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 L3HYPDHQ96EM0 354 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 WDR34Q96EX3 536 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 PTCD3Q96EY7 689 aaKnown RBP14.57□□□□□ -0.08
RNF40-205ENST00000563909 PIK3IP1Q96FE7 263 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 EFCAB11Q9BUY7 163 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 C19orf24Q9BVV8 132 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 ZNF703Q9H7S9 590 aaPredicted RBP14.57□□□□□ -0.08
RNF40-205ENST00000563909 IPPKQ9H8X2 491 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 ACKR4Q9NPB9 350 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 OXSMQ9NWU1 459 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 PCTPQ9UKL6 214 aa14.57□□□□□ -0.08
RNF40-205ENST00000563909 DEFB108AA8MXU0 73 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 SIAH2O43255 324 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 UGDHO60701 494 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 ERN1O75460 977 aaKnown RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 SUPT7LO94864 414 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 IL18BPO95998 194 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 RNH1P13489 461 aaKnown RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 EPORP19235 508 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 HK2P52789 917 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 RAB8AP61006 207 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 REEP5Q00765 189 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 DOC2AQ14183 400 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 E2F2Q14209 437 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 SF3B4Q15427 424 aaKnown RBP eCLIP14.56□□□□□ -0.088e-7■■■□□ 15.7
RNF40-205ENST00000563909 HIST2H2ACQ16777 129 aaPredicted RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 UNC50Q53HI1 259 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 LIPMQ5VYY2 423 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 HIST2H2AA3Q6FI13 130 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 HSDL2Q6YN16 418 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.56□□□□□ -0.08
RNF40-205ENST00000563909 MEIOBQ8N635 442 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 NT5CQ8TCD5 201 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 UTP15Q8TED0 518 aaKnown RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 ZNF483Q8TF39 744 aaPredicted RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 UBE2E3Q969T4 207 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 ARL8AQ96BM9 186 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 ATP6V1G3Q96LB4 118 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 TRIB1Q96RU8 372 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 TIMP4Q99727 224 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 NT5DC2Q9H857 520 aa14.56□□□□□ -0.08
RNF40-205ENST00000563909 CLK4Q9HAZ1 481 aaKnown RBP14.56□□□□□ -0.08
RNF40-205ENST00000563909 DSCAMO60469 2012 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 ZNF354AO60765 605 aaPredicted RBP14.55□□□□□ -0.08
RNF40-205ENST00000563909 TRIM13O60858 407 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 SASH3O75995 380 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 GSTM2P28161 218 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 AHRP35869 848 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 HNF4AP41235 474 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 CCNG1P51959 295 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 SLC18A1P54219 525 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 KCNJ2P63252 427 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 CLCQ05315 142 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 SLBPQ14493 270 aaKnown RBP eCLIP14.55□□□□□ -0.08
RNF40-205ENST00000563909 PCLAFQ15004 111 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 RBBP5Q15291 538 aaKnown RBP14.55□□□□□ -0.08
RNF40-205ENST00000563909 CFAP157Q5JU67 520 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 LIPJQ5W064 366 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 TTLQ8NG68 377 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 NTMT1Q9BV86 223 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 NOL11Q9H8H0 719 aaKnown RBP14.55□□□□□ -0.08
RNF40-205ENST00000563909 ACTR8Q9H981 624 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 ZFP64Q9NPA5 681 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 ZFP69BQ9UJL9 534 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 BOKQ9UMX3 212 aaPredicted RBP14.55□□□□□ -0.08
RNF40-205ENST00000563909 STK38LQ9Y2H1 464 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 TESMINQ9Y4I5 508 aa14.55□□□□□ -0.08
RNF40-205ENST00000563909 ABCA1O95477 2261 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 URADA6NGE7 173 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CD8B2A6NJW9 211 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 HMGB1P1B2RPK0 211 aaPredicted RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 ATP8B1O43520 1251 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CD5LO43866 347 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 PRAMEF4O60810 478 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 SOX30O94993 753 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CLDN9O95484 217 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 OTCP00480 354 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 FAM157CP0CG43 387 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 ALDH3A1P30838 453 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 ARL1P40616 181 aaPredicted RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 ETV4P43268 484 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 SCTRP47872 440 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 NAGLUP54802 743 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CDH13P55290 713 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 CRYZQ08257 329 aaKnown RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 FOXF2Q12947 444 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 DUSP8Q13202 625 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 WIPI1Q5MNZ9 446 aaPredicted RBP14.54□□□□□ -0.08
RNF40-205ENST00000563909 PRAMEF9Q5VWM5 478 aa14.54□□□□□ -0.08
RNF40-205ENST00000563909 GRHL2Q6ISB3 625 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms