RNA–Protein interactions for RNA: ENST00000561685.1

RRN3-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 5

Gene RRN3, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-204ENST00000561685 NACAP1Q9BZK3 213 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 PORCNQ9H237 461 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 C10orf88Q9H8K7 445 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 NMUR1Q9HB89 426 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 TRMT112Q9UI30 125 aaKnown RBP2.29□□□□□ -2.04
RRN3-204ENST00000561685 LRRK2Q5S007 2527 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 PTPRQQ9UMZ3 2332 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 ASXL3Q9C0F0 2248 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 PTPRSQ13332 1948 aa2.29□□□□□ -2.04
RRN3-204ENST00000561685 ADGRG4Q8IZF6 3080 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 BOD1L1Q8NFC6 3051 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 TSC2P49815 1807 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 ROBO3Q96MS0 1386 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 KLF18A0A0U1RQI7 1052 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 E5RGE8 158 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 E7ENQ6 273 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 PGRMC2O15173 223 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 AHCYL1O43865 530 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 SRPX2O60687 465 aaPredicted RBP2.28□□□□□ -2.04
RRN3-204ENST00000561685 GFPT2O94808 682 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 GJB5O95377 273 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 PIGRP01833 764 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 RETP07949 1114 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 MYBL1P10243 752 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 HSPA4P34932 840 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 RFC2P35250 354 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 SLC1A6P48664 564 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NOVA1P51513 510 aaKnown RBP2.28□□□□□ -2.04
RRN3-204ENST00000561685 EVCP57679 992 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 GPM6BQ13491 265 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 RASA2Q15283 850 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 LTB4RQ15722 352 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 LRRC37A5PQ49AS3 106 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 SLC22A6Q4U2R8 563 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 RFTN2Q52LD8 501 aaPredicted RBP2.28□□□□□ -2.04
RRN3-204ENST00000561685 EPC2Q52LR7 807 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 FKBP1CQ5VVH2 108 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 REP15Q6BDI9 236 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 ZNF600Q6ZNG1 722 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NUFIP2Q7Z417 695 aaKnown RBP2.28□□□□□ -2.04
RRN3-204ENST00000561685 C5orf24Q7Z6I8 188 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 PPP1R16AQ96I34 528 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 ZNF558Q96NG5 402 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 HSD17B14Q9BPX1 270 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 TRIM7Q9C029 511 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 FZD8Q9H461 694 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.28□□□□□ -2.04
RRN3-204ENST00000561685 DHRS4-AS1Q9P1J3 65 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NRBP1Q9UHY1 535 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 ZNF346Q9UL40 294 aaKnown RBP2.28□□□□□ -2.04
RRN3-204ENST00000561685 RAB23Q9ULC3 237 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NSG2Q9Y328 171 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NIPBLQ6KC79 2804 aaeCLIP2.28□□□□□ -2.04
RRN3-204ENST00000561685 ATG2AQ2TAZ0 1938 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 ZNF236Q9UL36 1845 aa2.28□□□□□ -2.04
RRN3-204ENST00000561685 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 MYO10Q9HD67 2058 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 GRIN2DO15399 1336 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 TRAV9-2A0A087WT02 112 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 E2F3O00716 465 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 FGF19O95750 216 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 BRCC3P46736 316 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 CDX1P47902 265 aaPredicted RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 CCNA1P78396 465 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 IRX3P78415 501 aaPredicted RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 IFI35P80217 286 aaPredicted RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 PCK2Q16822 640 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 ZNF542PQ5EBM4 170 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 LRRC73Q5JTD7 316 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.27□□□□□ -2.05
RRN3-204ENST00000561685 MOXD1Q6UVY6 613 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 PLPPR4Q7Z2D5 763 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 DEFB128Q7Z7B8 93 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 TBC1D10CQ8IV04 446 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 ZNF525Q8N782 197 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 PI4KAP1Q8N8J0 262 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 FLVCR1-AS1Q8TAF5 88 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 PCNPQ8WW12 178 aaKnown RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 AK8Q96MA6 479 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 RCHY1Q96PM5 261 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 SIGLEC12Q96PQ1 595 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 CHMP4AQ9BY43 222 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 DEFB126Q9BYW3 111 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 ZBP1Q9H171 429 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 DPEP2Q9H4A9 486 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 CD209Q9NNX6 404 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 ZNF275Q9NSD4 429 aaPredicted RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 TMOD2Q9NZR1 351 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 Q9UF83 564 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 RSPH14Q9UHP6 348 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 COL6A6A6NMZ7 2263 aa2.27□□□□□ -2.05
RRN3-204ENST00000561685 SPENQ96T58 3664 aaKnown RBP2.27□□□□□ -2.05
RRN3-204ENST00000561685 CRYBG3Q68DQ2 2970 aa2.26□□□□□ -2.05
RRN3-204ENST00000561685 USP9YO00507 2555 aaPredicted RBP2.26□□□□□ -2.05
RRN3-204ENST00000561685 CELSR2Q9HCU4 2923 aa2.26□□□□□ -2.05
RRN3-204ENST00000561685 SYNRGQ9UMZ2 1314 aa2.26□□□□□ -2.05
RRN3-204ENST00000561685 TEX48A0A1B0GUV7 120 aa2.26□□□□□ -2.05
RRN3-204ENST00000561685 LOC390937A0A1W2PQ73 354 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms