RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ABCD3P28288 659 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 CASP3P42574 277 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 MASP1P48740 699 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 DGKQP52824 942 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 RPP38P78345 283 aaKnown RBP11.96□□□□□ -0.49
TPM1-220ENST00000559556 ACAP2Q15057 778 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 GOLGA7Q7Z5G4 137 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 FBXO25Q8TCJ0 367 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 FBF1Q8TES7 1133 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 WDYHV1Q96HA8 205 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 UGT2B28Q9BY64 529 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 FETUBQ9UGM5 382 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 RPH3AQ9Y2J0 694 aaPredicted RBP11.96□□□□□ -0.49
TPM1-220ENST00000559556 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 HMX2A2RU54 273 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 TUBAL3A6NHL2 446 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 KLHL2O95198 593 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 ATE1O95260 518 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 IL18BPO95998 194 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 C2P06681 752 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 S1PR1P21453 382 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 GPX3P22352 226 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 CTSSP25774 331 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 PTPN6P29350 595 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 OPRM1P35372 400 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 MAGEA4P43358 317 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 CAV1Q03135 178 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 EIPR1Q53HC9 387 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 C6orf163Q5TEZ5 329 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 TIGD3Q6B0B8 471 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 CCDC25Q86WR0 208 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 PRR22Q8IZ63 422 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 FAM83FQ8NEG4 500 aaPredicted RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 SPATA4Q8NEY3 305 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 OR4K14Q8NGD5 310 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 ABTB1Q969K4 478 aaPredicted RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 GPR78Q96P69 363 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 SERPINI1Q99574 410 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 NXF5Q9H1B4 397 aaKnown RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 PLEKHF2Q9H8W4 249 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 DTX4Q9Y2E6 619 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 TNPO3Q9Y5L0 923 aaKnown RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 YLPM1P49750 1951 aaKnown RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 ABCA1O95477 2261 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
TPM1-220ENST00000559556 HEATR1Q9H583 2144 aaKnown RBP11.95□□□□□ -0.5
TPM1-220ENST00000559556 EEF1E1-BLOC1S5C9J1V9 151 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 OR7A17O14581 309 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 EEF1E1O43324 174 aaKnown RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 PPM1BO75688 479 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 SIX3O95343 332 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 CLDN9O95484 217 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 ACTL6AO96019 429 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 ABCB1P08183 1280 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 RHOXF2BP0C7M4 288 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 CPMP14384 443 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 PORP16435 677 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 NAGAP17050 411 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 SOX18P35713 384 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 XKP51811 444 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 NEK2P51955 445 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 NAGLUP54802 743 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 PLTPP55058 493 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 GUCY2DQ02846 1103 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 RCAN2Q14206 197 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 TECRLQ5HYJ1 363 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 C10orf62Q5T681 223 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 KLC3Q6P597 504 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 ADGRE4PQ86SQ3 457 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 VWA5B2Q8N398 1253 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 OR1J4Q8NGS1 313 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 ZPLD1Q8TCW7 415 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 ZFP3Q96NJ6 502 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 NTMT1Q9BV86 223 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 EPB41L4BQ9H329 900 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 METTL7AQ9H8H3 244 aa11.94□□□□□ -0.5
TPM1-220ENST00000559556 CPSF2Q9P2I0 782 aaKnown RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 UTP11Q9Y3A2 253 aaKnown RBP11.94□□□□□ -0.5
TPM1-220ENST00000559556 CLCA1A8K7I4 914 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 GNB5O14775 395 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 SNPHO15079 494 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 ALDOAP04075 364 aaKnown RBP11.93□□□□□ -0.5
TPM1-220ENST00000559556 ATP1B1P05026 303 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 TMIGD3P0DMS9 266 aaPredicted RBP11.93□□□□□ -0.5
TPM1-220ENST00000559556 CPN1P15169 458 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 KRT15P19012 456 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 PTGDSP41222 190 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 SLCO1A2P46721 670 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 CCNG1P51959 295 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 C2orf54Q08AI8 447 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 TRAF3Q13114 568 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 SNTA1Q13424 505 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms