RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RAB3IL1Q8TBN0 382 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 C5orf34Q96MH7 638 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 AMDHD1Q96NU7 426 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 NXF5Q9H1B4 397 aaKnown RBP17.28■□□□□ 0.36
CASC4-209ENST00000559222 MEAF6Q9HAF1 191 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 SLCO1B3Q9NPD5 702 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 GIMAP4Q9NUV9 329 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 HPF1Q9NWY4 346 aa17.28■□□□□ 0.36
CASC4-209ENST00000559222 NCKAP5O14513 1909 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 NBASA2RRP1 2371 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 GOLGA8QA0A0J9YX86 632 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 C2orf92A0A1B0GVN3 265 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 GOLGA8OA6NCC3 632 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 GOLGA8NF8WBI6 632 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 SCAMP2O15127 329 aaKnown RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 PDPK1O15530 556 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 CCL3P10147 92 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 CD46P15529 392 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 GNLYP22749 145 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 RFC3P40938 356 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 CDK9P50750 372 aaKnown RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 ZNF791Q3KP31 576 aaPredicted RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 RNFT1Q5M7Z0 435 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 ATG16L1Q676U5 607 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 ZNF324BQ6AW86 544 aaPredicted RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 DESI1Q6ICB0 168 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 CPSF7Q8N684 471 aaKnown RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 GOLGA6L1Q8N7Z2 621 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 OR7G1Q8NGA0 311 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 PPCDCQ96CD2 204 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 FRMD6Q96NE9 622 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 TSPAN10Q9H1Z9 355 aaPredicted RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 WDR55Q9H6Y2 383 aaPredicted RBP17.27■□□□□ 0.36
CASC4-209ENST00000559222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.27■□□□□ 0.36
CASC4-209ENST00000559222 SH3BP4Q9P0V3 963 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 ERVK-11Q9UQG0 969 aa17.27■□□□□ 0.36
CASC4-209ENST00000559222 TENM4Q6N022 2769 aa17.27■□□□□ 0.35
CASC4-209ENST00000559222 KLF11O14901 512 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 TBX19O60806 448 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 SNUPNO95149 360 aaKnown RBP17.26■□□□□ 0.35
CASC4-209ENST00000559222 RASAL1O95294 804 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 ALDOCP09972 364 aaKnown RBP17.26■□□□□ 0.35
CASC4-209ENST00000559222 LAMP1P11279 417 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 NTSP30990 170 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 TDGF1P3P51864 188 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 EMX2Q04743 252 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 HSPB3Q12988 150 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 FAM180AQ6UWF9 173 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 NPSR1Q6W5P4 371 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 LARP4Q71RC2 724 aaKnown RBP eCLIP17.26■□□□□ 0.35
CASC4-209ENST00000559222 SULF2Q8IWU5 870 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 FAR1Q8WVX9 515 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 MAGED4Q96JG8 741 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 ATP6V1HQ9UI12 483 aa17.26■□□□□ 0.35
CASC4-209ENST00000559222 WBP11Q9Y2W2 641 aaKnown RBP17.26■□□□□ 0.35
CASC4-209ENST00000559222 ZNF195O14628 629 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 WISP1O95388 367 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 PRPS2P11908 318 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 MAPK1P28482 360 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 EPHA3P29320 983 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 MPIP34949 423 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 FRKP42685 505 aaPredicted RBP17.25■□□□□ 0.35
CASC4-209ENST00000559222 ASMTP46597 345 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 MEOX1P50221 254 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 SLC9B1Q4ZJI4 515 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 WDR53Q7Z5U6 358 aaPredicted RBP17.25■□□□□ 0.35
CASC4-209ENST00000559222 RIMKLAQ8IXN7 391 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 SAMD14Q8IZD0 417 aaPredicted RBP17.25■□□□□ 0.35
CASC4-209ENST00000559222 TMEM178AQ8NBL3 297 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 PSD4Q8NDX1 1056 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 OR10G3Q8NGC4 313 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 OR5M3Q8NGP4 307 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 SLC22A8Q8TCC7 542 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 SPACA9Q96E40 222 aaPredicted RBP17.25■□□□□ 0.35
CASC4-209ENST00000559222 ZNF764Q96H86 408 aaPredicted RBP17.25■□□□□ 0.35
CASC4-209ENST00000559222 SLX1AQ9BQ83 275 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 SH2D2AQ9NP31 389 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 ASIC5Q9NY37 505 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 PCDHGB6Q9Y5F9 930 aa17.25■□□□□ 0.35
CASC4-209ENST00000559222 RELNP78509 3460 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 ASPDHA6ND91 283 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 UPK1AO00322 258 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 HDAC3O15379 428 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 ZNHIT1O43257 154 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 FBXO45P0C2W1 286 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 HPCAL1P37235 193 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 CORO7P57737 925 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 FBXW4P57775 412 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 INAQ16352 499 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 HLA-DQA1Q5Y7H0 255 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 OPN5Q6U736 354 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 RTL4Q6ZR62 310 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 HORMAD2Q8N7B1 307 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 BCORP1Q8N888 145 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 NR4A3Q92570 626 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 TMEM125Q96AQ2 219 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 MARK4Q96L34 752 aa17.24■□□□□ 0.35
CASC4-209ENST00000559222 VSTM2LQ96N03 204 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms