RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 TMEM169Q96HH4 297 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 ZNF558Q96NG5 402 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 LRFN5Q96NI6 719 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 TSSK3Q96PN8 268 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 TRNT1Q96Q11 434 aaKnown RBP5.24□□□□□ -1.57
GABPB1-207ENST00000558335 ZNF607Q96SK3 696 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 NEU1Q99519 415 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 SSX3Q99909 188 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 KCNS3Q9BQ31 491 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 MED18Q9BUE0 208 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 CDCA4Q9BXL8 241 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 NLNQ9BYT8 704 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 GPR62Q9BZJ7 368 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 REXO4Q9GZR2 422 aaKnown RBP5.24□□□□□ -1.57
GABPB1-207ENST00000558335 FAM83DQ9H4H8 585 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 REEP4Q9H6H4 257 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 WDR26Q9H7D7 661 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 NEUROD4Q9HD90 331 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 MYNNQ9NPC7 610 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 EQTNQ9NQ60 294 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 MRPL17Q9NRX2 175 aaKnown RBP5.24□□□□□ -1.57
GABPB1-207ENST00000558335 TRMT13Q9NUP7 481 aaKnown RBP5.24□□□□□ -1.57
GABPB1-207ENST00000558335 MARCH5Q9NX47 278 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 ELOVL2Q9NXB9 296 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 NKIRAS2Q9NYR9 191 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 NDUFAF4Q9P032 175 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 ERVK-18Q9QC07 812 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 FZD4Q9ULV1 537 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 PCDHB10Q9UN67 800 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 ABCG2Q9UNQ0 655 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 TRAPPC4Q9Y296 219 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 RPL36Q9Y3U8 105 aaKnown RBP5.24□□□□□ -1.57
GABPB1-207ENST00000558335 YIPF1Q9Y548 306 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 LYVE1Q9Y5Y7 322 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 DOCK3Q8IZD9 2030 aa5.24□□□□□ -1.57
GABPB1-207ENST00000558335 A0A0G2JMP0 313 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 A0A1B0GTL3 188 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GNG14A0A1W2PPG7 69 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 KRT87PA6NCN2 255 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 MFSD2BA6NFX1 497 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 METTL15A6NJ78 407 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GPR89AB7ZAQ6 455 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 E9PQ18 207 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GFRA2O00451 464 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 FAAHO00519 579 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 SLC30A4O14863 429 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 NUPL2O15504 423 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 SGCEO43556 437 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 HCRTR2O43614 444 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 NBNO60934 754 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 AOC2O75106 756 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CBR3O75828 277 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 RPP14O95059 124 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GJB5O95377 273 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CLDN7O95471 211 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CPSF4O95639 269 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 FADS2O95864 444 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 LRG1P02750 347 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 MT-ND2P03891 347 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 KLKB1P03952 638 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 IFNW1P05000 195 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 HTR1AP08908 422 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CD63P08962 238 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GPR89BP0CG08 455 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 ZNF8P17098 575 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 HK1P19367 917 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GSTM3P21266 225 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 UQCRC2P22695 453 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PSMA1P25786 263 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PTPN6P29350 595 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PPP2R1BP30154 601 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GDI1P31150 447 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GALNSP34059 522 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CHI3L1P36222 383 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 POLR2IP36954 125 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PIGAP37287 484 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CD96P40200 585 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 GATMP50440 423 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 DAPP51397 102 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 SNRPGP62308 76 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CTBSQ01459 385 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PPIGQ13427 754 aaKnown RBP eCLIP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 RGNQ15493 299 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CDKN3Q16667 212 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 AAK1Q2M2I8 961 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PTCHD3Q3KNS1 767 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 ADPRMQ3LIE5 342 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 KLHL22Q53GT1 634 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PYCR3Q53H96 274 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 ARHGAP15Q53QZ3 475 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 KRTCAP3Q53RY4 240 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 PABPC1L2AQ5JQF8 200 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 COLEC12Q5KU26 742 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 TPRG1LQ5T0D9 272 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 OR4F3Q6IEY1 312 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 ARMC6Q6NXE6 501 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 ARHGAP11AQ6P4F7 1023 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 C22orf39Q6P5X5 142 aa5.23□□□□□ -1.57
GABPB1-207ENST00000558335 KIAA1324Q6UXG2 1013 aaKnown RBP5.23□□□□□ -1.57
GABPB1-207ENST00000558335 CASP12Q6UXS9 341 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms