RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.9□□□□□ -0.5
APEX1-216ENST00000557159 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 LYARQ9NX58 379 aaKnown RBP11.9□□□□□ -0.5
APEX1-216ENST00000557159 CBLCQ9ULV8 474 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 MYO9BQ13459 2157 aa11.9□□□□□ -0.5
APEX1-216ENST00000557159 A0A0A6YYJ9 748 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 TRBV4-1A0A0J9YWV2 114 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 HPGDSO60760 199 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 TP53P04637 393 aaPredicted RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 ACP2P11117 423 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 CD22P20273 847 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 ELAVL4P26378 380 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 POU1F1P28069 291 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 CCR7P32248 378 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 ETV5P41161 510 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 ETV1P50549 477 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 RPS24P62847 133 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 RPS25P62851 125 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 SEMG2Q02383 582 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 SNTA1Q13424 505 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 GALEQ14376 348 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 PTPRRQ15256 657 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 CHRNA6Q15825 494 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 ARHGAP15Q53QZ3 475 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 SYT14P1Q58G82 188 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 PXDC1Q5TGL8 231 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 MRGPREQ86SM8 312 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 METTL3Q86U44 580 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 ADGRG2Q8IZP9 1017 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 UBE2J2Q8N2K1 259 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 C1GALT1C1Q96EU7 318 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 POLR2J3Q9H1A7 115 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 ASB6Q9NWX5 421 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 EMC3Q9P0I2 261 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 COPZ2Q9P299 210 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 COMMD3Q9UBI1 195 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 MGAT4AQ9UM21 535 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 EXO1Q9UQ84 846 aaKnown RBP11.89□□□□□ -0.51
APEX1-216ENST00000557159 YIPF1Q9Y548 306 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 EYSQ5T1H1 3165 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 A0A0C4DFX4 3053 aa11.89□□□□□ -0.51
APEX1-216ENST00000557159 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CXorf51AA0A1B0GTR3 108 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 C2orf78A6NCI8 922 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 ISM1B1AKI9 464 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 SMLR1H3BR10 107 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PRRG1O14668 218 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CASKO14936 926 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CASC3O15234 703 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 KLKB1P03952 638 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 HLA-DPB1P04440 258 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PEPDP12955 493 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 RPL17P18621 184 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 AGFG1P52594 562 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 ZXDBP98169 803 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■■■□ 20.9
APEX1-216ENST00000557159 GANABQ14697 944 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 XKR6Q5GH73 641 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 REEP3Q6NUK4 255 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PGBD2Q6P3X8 592 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PAQR6Q6TCH4 344 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 TPGS1Q6ZTW0 290 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 GLCCI1Q86VQ1 547 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 COMMD7Q86VX2 200 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 ZNF582Q96NG8 517 aaPredicted RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 ZSCAN5AQ9BUG6 496 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 WRAP53Q9BUR4 548 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 ABCG8Q9H221 673 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CLEC4MQ9H2X3 399 aaPredicted RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 GLS2Q9UI32 602 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 KIF25Q9UIL4 384 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CCDC88CQ9P219 2028 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 REV3LO60673 3130 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 PRODHO43272 600 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 URODP06132 367 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 ALPIP09923 528 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 RFX3P48380 749 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 SOX9P48436 509 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CLCNKAP51800 687 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 GBX2P52951 348 aaPredicted RBP11.88□□□□□ -0.51
APEX1-216ENST00000557159 LIM2P55344 173 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 RHOAP61586 193 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 CDK5Q00535 292 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 FABP5Q01469 135 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 ZNF763Q0D2J5 394 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 GPR176Q14439 515 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 FCN2Q15485 313 aa11.88□□□□□ -0.51
APEX1-216ENST00000557159 RNF219Q5W0B1 726 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms