RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ERVK-18Q9QC07 812 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 GRID1Q9ULK0 1009 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 OR1A2Q9Y585 309 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 SLCO1B1Q9Y6L6 691 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CACNA1FO60840 1977 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 SMCHD1A6NHR9 2005 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 A0A0G2JNG1 304 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 FAM240BA0A1B0GVZ2 78 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 A0A1W2PN81 502 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 METTL21EPA6NDL7 271 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 SRRM4A7MD48 611 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 WASH3PC4AMC7 463 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 FCMRO60667 390 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 PRKRAO75569 313 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 TPM1P09493 284 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 PABPC4LP0CB38 370 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 CHRNA7P36544 502 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 ACADSBP45954 432 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 NPY2RP49146 381 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 GNB1P62873 340 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 TGM3Q08188 693 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 MFAP5Q13361 173 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 EXOSC2Q13868 293 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 DOC2AQ14183 400 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 SQLEQ14534 574 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 KIR2DS5Q14953 304 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 DUOXA1Q1HG43 343 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 PDLIM3Q53GG5 364 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 XKR3Q5GH77 459 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 LYPLAL1Q5VWZ2 237 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 ZNF776Q68DI1 518 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 RTL6Q6ICC9 239 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 DHRS11Q6UWP2 260 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 CENPUQ71F23 418 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 C16orf62Q7Z3J2 963 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 CDR2LQ86X02 465 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 VSTM4Q8IW00 320 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 RCOR2Q8IZ40 523 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 LRRC75A-AS1Q8N1F1 130 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 NECAB1Q8N987 351 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 COLGALT1Q8NBJ5 622 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 RDM1Q8NG50 284 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 OR9K2Q8NGE7 335 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 SLC2A14Q8TDB8 520 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 HCAR2Q8TDS4 363 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 GRHL3Q8TE85 626 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 TMEM37Q8WXS4 190 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 TMEM190Q8WZ59 177 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 HPDLQ96IR7 371 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 VSTM2LQ96N03 204 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 AGAP3Q96P47 875 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 CCNL2Q96S94 520 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 RTP3Q9BQQ7 232 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 WRAP53Q9BUR4 548 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 PNNQ9H307 717 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 ELOVL3Q9HB03 270 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 OLFML3Q9NRN5 406 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 PLEK2Q9NYT0 353 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 OR6C2Q9NZP2 312 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 SPATA7Q9P0W8 599 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 EPHA6Q9UF33 1036 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 ZNF490Q9ULM2 529 aaPredicted RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 DIMT1Q9UNQ2 313 aaKnown RBP4.6□□□□□ -1.67
VRK1-203ENST00000555067 COLEC10Q9Y6Z7 277 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 KIF7Q2M1P5 1343 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 PTPRUQ92729 1446 aa4.6□□□□□ -1.67
VRK1-203ENST00000555067 A0A0G2JLW4 131 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SH3PXD2BA1X283 911 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 YJEFN3A6XGL0 299 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 C2CD4DB7Z1M9 353 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 HHLA1C9JL84 531 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 E9PMD0 336 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SGK494L7N484 410 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 WRBO00258 174 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 NDUFA7O95182 113 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 CAVIN2O95810 425 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 EML2O95834 649 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 HPRP00739 348 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 IGLV1-44P01699 117 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 MT-ND2P03891 347 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SLC2A3P11169 496 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 CPN1P15169 458 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TSPAN8P19075 237 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TPSB2P20231 275 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 CSTF2P33240 577 aaKnown RBP eCLIP4.59□□□□□ -1.67
VRK1-203ENST00000555067 CYLC1P35663 651 aaPredicted RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 HAND2P61296 217 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 NOTCH2Q04721 2471 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 GPR50Q13585 617 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 HERC3Q15034 1050 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TPSAB1Q15661 275 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 PCK2Q16822 640 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 HKDC1Q2TB90 917 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 CDC42EP5Q6NZY7 148 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 SLC27A4Q6P1M0 643 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 TMEM64Q6YI46 380 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 NOTCH2NLQ7Z3S9 236 aa4.59□□□□□ -1.67
VRK1-203ENST00000555067 MYH14Q7Z406 1995 aaKnown RBP4.59□□□□□ -1.67
VRK1-203ENST00000555067 ZNF683Q8IZ20 524 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms