RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PTGDSP41222 190 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 STARP49675 285 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 DIO3P55073 304 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ARL4CP56559 192 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 NRG3P56975 720 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ATP6V0D1P61421 351 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 RPS13P62277 151 aaKnown RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 RPP38P78345 283 aaKnown RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 FAM27E3Q08E93 113 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 FUT7Q11130 342 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 PDIA2Q13087 525 aaKnown RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 CBLBQ13191 982 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ACKR1Q16570 336 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 MYLK4Q86YV6 388 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 TRIM42Q8IWZ5 723 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 GALNT12Q8IXK2 581 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF615Q8N8J6 731 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 OR14L1PQ8NHC6 308 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 WNT2BQ93097 391 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 NODALQ96S42 347 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 CENPKQ9BS16 269 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 OSBPL11Q9BXB4 747 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 NXF5Q9H1B4 397 aaKnown RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ACBD3Q9H3P7 528 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 LYARQ9NX58 379 aaKnown RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 PPP2R2CQ9Y2T4 447 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 RTTNQ86VV8 2226 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 A0A1W2PNV4 684 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CXorf49A8MYA2 514 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-209ENST00000553308 SUPT3HB4E1H0 165 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 K7EPI3 171 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 UBXN8O00124 270 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 PLOD2O00469 737 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 PGRMC2O15173 223 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 TP73O15350 636 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 ICOSLGO75144 302 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 SUPT3HO75486 399 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 PPM1BO75688 479 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
SYNE2-209ENST00000553308 TGM6O95932 706 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GBAP04062 536 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 NID1P14543 1247 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 STMN1P16949 149 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 KRT15P19012 456 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 FPR1P21462 350 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GPX3P22352 226 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CRYGSP22914 178 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CNTFP26441 200 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GCKP35557 465 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 PIK3CBP42338 1070 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 PTH2RP49190 550 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 LHX2P50458 406 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GFRA1P56159 465 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 OR52E8Q6IFG1 317 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 VWA1Q6PCB0 445 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CYP20A1Q6UW02 462 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 ENPP6Q6UWR7 440 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GRAMD2AQ8IUY3 354 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 UBTD2Q8WUN7 234 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 HGDQ93099 445 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 CTHRC1Q96CG8 243 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 TSPAN17Q96FV3 270 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 UBXN10Q96LJ8 280 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 UCN2Q96RP3 112 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 GPR22Q99680 433 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 MED18Q9BUE0 208 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 OR2B2Q9GZK3 357 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 ALG9Q9H6U8 611 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
SYNE2-209ENST00000553308 WDR41Q9HAD4 459 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 NSMCE4AQ9NXX6 385 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 EHD3Q9NZN3 535 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 OPTCQ9UBM4 332 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 ADGRE2Q9UHX3 823 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 ARID1AO14497 2285 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 MED12LQ86YW9 2145 aa8.24□□□□□ -1.09
SYNE2-209ENST00000553308 MSTNO14793 375 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 HCRTR2O43614 444 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 CDH16O75309 829 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 UGT2B11O75310 529 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 RHOXF2BP0C7M4 288 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 EPB42P16452 691 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 S1PR1P21453 382 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 NT5EP21589 574 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TCEA1P23193 301 aaKnown RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 PIK3R1P27986 724 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 LOXP28300 417 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 CD79BP40259 229 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 MC3RP41968 323 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 CLDN18P56856 261 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 PLCXD2Q0VAA5 305 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms