RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 EXTL2Q9UBQ6 330 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 UPB1Q9UBR1 384 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 PURGQ9UJV8 347 aaKnown RBP5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 ACSL6Q9UKU0 697 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 ACAD8Q9UKU7 415 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 POMT2Q9UKY4 750 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 PNMA8BQ9ULN7 279 aaPredicted RBP5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 SCML1Q9UN30 329 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 PLCL2Q9UPR0 1127 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 OARD1Q9Y530 152 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 PCDHB11Q9Y5F2 797 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 SNX8Q9Y5X2 465 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 SPTBN4Q9H254 2564 aa5.34□□□□□ -1.55
TMEM106C-221ENST00000553217 OTOGLQ3ZCN5 2332 aa5.34□□□□□ -1.56
TMEM106C-221ENST00000553217 SPTBN2O15020 2390 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 A0A0G2JMP0 313 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MTMR11A4FU01 709 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ASPDHA6ND91 283 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MFSD2BA6NFX1 497 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 D6RAR5 112 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 LRRN3E7EW58 273 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 L7N2F9 121 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RNASET2O00584 256 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ZNF197O14709 1029 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 SCAMP3O14828 347 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 FABP7O15540 132 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GSTZ1O43708 216 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GDF9O60383 454 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MAFKO60675 156 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 TPST2O60704 377 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MMP20O60882 483 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GRAP2O75791 330 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ARL6IP5O75915 188 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 KRT33AO76009 404 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ABLIM3O94929 683 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 PAPLNO95428 1278 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 CLDN9O95484 217 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 PRAMEF12O95522 483 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 NFATC1O95644 943 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 OLFM2O95897 454 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 DNTTP04053 509 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 C8GP07360 202 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ANXA5P08758 320 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 FGF2P09038 288 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 HIST1H2AGP0C0S8 130 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 SULT1A3P0DMM9 295 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 SULT1A4P0DMN0 295 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 G6PDP11413 515 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RHOQP17081 205 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GABRB1P18505 474 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 TSPAN8P19075 237 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 HDCP19113 662 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 HIST1H2ADP20671 130 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ITGALP20701 1170 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 NFYAP23511 347 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ARNTP27540 789 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RPL10P27635 214 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 HOXA9P31269 272 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 S100A11P31949 105 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 CCR7P32248 378 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GPC1P35052 558 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RPS19P39019 145 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 KIR2DL3P43628 341 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ZFP36L2P47974 494 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 FNTBP49356 437 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GDI2P50395 445 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RNF144AP50876 292 aaPredicted RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MMP15P51511 669 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 SMSP52788 366 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ARFIP1P53367 373 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 CRISP1P54107 249 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 EPHA5P54756 1037 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 DAOAP59103 153 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RAB5BP61020 215 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RPL38P63173 70 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RACK1P63244 317 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 TAP2Q03519 686 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 LGALS3BPQ08380 585 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ADIGQ0VDE8 80 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 RPA4Q13156 261 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 EXOSC2Q13868 293 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 FGFBP1Q14512 234 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GBX1Q14549 363 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 STK11Q15831 433 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 MICBQ29980 383 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 GPR33Q49SQ1 333 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 USP39Q53GS9 565 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 XKR4Q5GH76 650 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 CRB2Q5IJ48 1285 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 PABPC1L2AQ5JQF8 200 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ARMC12Q5T9G4 340 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 PXDC1Q5TGL8 231 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 NXNL2Q5VZ03 156 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 LIPJQ5W064 366 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 HBMQ6B0K9 141 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 FRMPD2BQ6IN97 320 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 ADNP2Q6IQ32 1131 aa5.33□□□□□ -1.56
TMEM106C-221ENST00000553217 SLC8B1Q6J4K2 584 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms