RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 CD79BP40259 229 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 HNRNPH2P55795 449 aaKnown RBP15.38■□□□□ 0.05
VPS29-204ENST00000548259 E2F2Q14209 437 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 OR52E8Q6IFG1 317 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 TMEM81Q6P7N7 255 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 PLEKHM3Q6ZWE6 761 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 NUP54Q7Z3B4 507 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 MYLK4Q86YV6 388 aaPredicted RBP15.38■□□□□ 0.05
VPS29-204ENST00000548259 TRIM42Q8IWZ5 723 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 SPATA6LQ8N4H0 392 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 HUS1BQ8NHY5 278 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 WFIKKN1Q96NZ8 548 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 OSBPL11Q9BXB4 747 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 OR10A5Q9H207 317 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 CXorf56Q9H5V9 222 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 PLAC1Q9HBJ0 212 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 ELOVL5Q9NYP7 299 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 EXO1Q9UQ84 846 aaKnown RBP15.38■□□□□ 0.05
VPS29-204ENST00000548259 DLGAP4Q9Y2H0 992 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 PCDHGA11Q9Y5H2 935 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 TEX264Q9Y6I9 313 aa15.38■□□□□ 0.05
VPS29-204ENST00000548259 FBN1P35555 2871 aaKnown RBP15.37■□□□□ 0.05
VPS29-204ENST00000548259 A0A1W2PNV4 684 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 RNF212BA8MTL3 300 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 DEFB108AA8MXU0 73 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 K7EPI3 171 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 PLPP1O14494 284 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 PPM1BO75688 479 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 ABCB1P08183 1280 aaPredicted RBP15.37■□□□□ 0.05
VPS29-204ENST00000548259 FAM58BPP0C7Q3 252 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 EPB42P16452 691 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 STMN1P16949 149 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 PTH2RP49190 550 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 GRHL2Q6ISB3 625 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 ADGRE4PQ86SQ3 457 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 PRR22Q8IZ63 422 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 CNEP1R1Q8N9A8 125 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 STAG3L4Q8TBR4 150 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 ACTRT1Q8TDG2 376 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 TMEM171Q8WVE6 324 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 EXT2Q93063 718 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 TAS2R10Q9NYW0 307 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 CLCF1Q9UBD9 225 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 ADAM21Q9UKJ8 722 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 MAPRE3Q9UPY8 281 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 ANGPTL3Q9Y5C1 460 aa15.37■□□□□ 0.05
VPS29-204ENST00000548259 RTTNQ86VV8 2226 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 PLOD2O00469 737 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 ICOSLGO75144 302 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 PRKRAO75569 313 aaKnown RBP15.36■□□□□ 0.05
VPS29-204ENST00000548259 CLPSP04118 112 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 EPORP19235 508 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 KCNJ5P48544 419 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 FAM27E3Q08E93 113 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 FUT7Q11130 342 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 FGFBP1Q14512 234 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 MEIOBQ8N635 442 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 OR4K14Q8NGD5 310 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 CDKL2Q92772 493 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 ADIPOR1Q96A54 375 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 MTERF1Q99551 399 aaKnown RBP15.36■□□□□ 0.05
VPS29-204ENST00000548259 OR2B2Q9GZK3 357 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 DDX31Q9H8H2 851 aaKnown RBP15.36■□□□□ 0.05
VPS29-204ENST00000548259 SERHLQ9NQF3 203 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 NUDT4Q9NZJ9 180 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 ASB4Q9Y574 426 aa15.36■□□□□ 0.05
VPS29-204ENST00000548259 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 A0A1W2PR48 441 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 C16orf97H3BN30 126 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 ACOX3O15254 700 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 TNFSF13O75888 250 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 TP53P04637 393 aaPredicted RBP15.35■□□□□ 0.05
VPS29-204ENST00000548259 POU2F1P14859 743 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 CD1DP15813 335 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 NT5EP21589 574 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 SOX18P35713 384 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 UGT2B10P36537 528 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 DMTNQ08495 405 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 PLCXD2Q0VAA5 305 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 CUL3Q13618 768 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 OR4D1Q15615 310 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 PODNL1Q6PEZ8 512 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 NUDT13Q86X67 352 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 ANKMY2Q8IV38 441 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 ZNF615Q8N8J6 731 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 RDH11Q8TC12 318 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 CAVIN3Q969G5 261 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 SFXN2Q96NB2 322 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 MOCS1Q9NZB8 636 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 TSC22D4Q9Y3Q8 395 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 ZANQ9Y493 2812 aa15.35■□□□□ 0.05
VPS29-204ENST00000548259 A0A0A6YYD5 115 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 PRAMEF25A6NGN4 478 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 SUPT3HB4E1H0 165 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 PHGDHO43175 533 aaKnown RBP15.34■□□□□ 0.05
VPS29-204ENST00000548259 SUPT3HO75486 399 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 AIFM1O95831 613 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 SRD5A2P31213 254 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms