RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 UGT2B17O75795 530 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 PTHP01270 115 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 IGFBP1P08833 259 aaPredicted RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF888P0CJ79 500 aaPredicted RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 HNRNPCL4P0DMR1 293 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 ACADMP11310 421 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 POU1F1P28069 291 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TGFBR1P36897 503 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TPMTP51580 245 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 UGT2B15P54855 530 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 PRR5P85299 388 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 OCA2Q04671 838 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TGM3Q08188 693 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TMED1Q13445 227 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 GNA13Q14344 377 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 KIR2DS3Q14952 304 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 KIAA1324Q6UXG2 1013 aaKnown RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 ASPGQ86U10 573 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 NRROSQ86YC3 692 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 KLHL6Q8WZ60 621 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLC22A18Q96BI1 424 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TM4SF19Q96DZ7 209 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 GIMAP5Q96F15 307 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 OR2A14Q96R47 310 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLC9A8Q9Y2E8 581 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TRBV23OR9-2A0A075B6M9 112 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 EFCAB9A8MZ26 197 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 C10orf142B7Z368 130 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TOR1BO14657 336 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 CASC3O15234 703 aaKnown RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TNFSF14O43557 240 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SOX14O95416 240 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SMIM10L1P0DMW3 83 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 NR2F6P10588 404 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 MAGP20916 626 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SNRPGP62308 76 aaKnown RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 RGS1Q08116 209 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 DGUOKQ16854 277 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 PODNL1Q6PEZ8 512 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 C16orf87Q6PH81 154 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 HMGN2P46Q86SG4 172 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 TRIM73Q86UV7 250 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SMIM10Q96HG1 83 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 MSLNLQ96KJ4 702 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 OR7D2Q96RA2 312 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLIRPQ9GZT3 109 aaKnown RBP13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLC38A1Q9H2H9 487 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 OSGIN1Q9UJX0 560 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 B3GNT3Q9Y2A9 372 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CLDN25C9JDP6 229 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TLR4O00206 839 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ASNA1O43681 348 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CTSVO60911 334 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 RASGRP1O95267 797 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 LIMK1P53667 647 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ALG11Q2TAA5 492 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 PRRT3Q5FWE3 981 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TMEM201Q5SNT2 666 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 MORN4Q8NDC4 146 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 PRRC1Q96M27 445 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TRPV5Q9NQA5 729 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 FBXO8Q9NRD0 319 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 GIMAP4Q9NUV9 329 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CLN6Q9NWW5 311 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CLDND1Q9NY35 253 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 BRWD1Q9NSI6 2320 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 P2RX6O15547 441 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 PIPP12273 146 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 UGT2B7P16662 529 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF12P17014 697 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 GADD45AP24522 165 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 GRK5P34947 590 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 XKP51811 444 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TNFRSF17Q02223 184 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ALDH6A1Q02252 535 aaKnown RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 NR1D2Q14995 579 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 LTB4RQ15722 352 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms