RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 GPR143P51810 404 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CCNG1P51959 295 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 PER3P56645 1201 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 KCNK10P57789 538 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RPS13P62277 151 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 IGLV3-21P80748 117 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 CUL3Q13618 768 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 ZRSR2Q15696 482 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 FAM153CQ494X1 144 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 C10orf62Q5T681 223 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 OR4C11Q6IEV9 310 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 GFRALQ6UXV0 394 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 TIFABQ6ZNK6 161 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 GALNTL5Q7Z4T8 443 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CCDC103Q8IW40 242 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 ZCCHC7Q8N3Z6 543 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 OR52B6Q8NGF0 335 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 OR14A16Q8NHC5 309 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 WDR20Q8TBZ3 569 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 DAZLQ92904 295 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 ANKRD9Q96BM1 317 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 MTBPQ96DY7 904 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RHOXF2Q9BQY4 288 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CCDC77Q9BR77 488 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 NTMT1Q9BV86 223 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CDADC1Q9BWV3 514 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 SORBS1Q9BX66 1292 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 ZNF717Q9BY31 904 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 TXLNGYQ9BZA5 131 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 LYARQ9NX58 379 aaKnown RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 PSD3Q9NYI0 1048 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 LRFN1Q9P244 771 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 PSMC3IPQ9P2W1 217 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 TNFRSF10DQ9UBN6 386 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 PLEKHB1Q9UF11 243 aaPredicted RBP6.53□□□□□ -1.36
YBX3-206ENST00000536823 FETUBQ9UGM5 382 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 FBXW2Q9UKT8 454 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 OSGIN2Q9Y236 505 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 RNF11Q9Y3C5 154 aa6.53□□□□□ -1.36
YBX3-206ENST00000536823 CROCCQ5TZA2 2017 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 A0A0A6YYD5 115 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 TMEM200CA6NKL6 621 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 TMPRSS11DO60235 418 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 FGF17O60258 216 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 PRKNO60260 465 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 NME2P1O60361 137 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 LDB3O75112 727 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ITGA10O75578 1167 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ZFAND5O76080 213 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 CLDN9O95484 217 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ETHE1O95571 254 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 MLYCDO95822 493 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SP1P08047 785 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SBK3P0C264 359 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 NR2F6P10588 404 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 COX7A2P14406 83 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 TLX1P31314 330 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 BSGP35613 385 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ARL1P40616 181 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 CYB561P49447 251 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SSR4P51571 173 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 HNRNPH2P55795 449 aaKnown RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 PLIN5Q00G26 463 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 TNFRSF17Q02223 184 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ID2Q02363 134 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 STX4Q12846 297 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 IFT88Q13099 833 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SLAMF1Q13291 335 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 GGTA1PQ4G0N0 100 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 LGSNQ5TDP6 509 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 FRG2Q64ET8 278 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SPINK14Q6IE38 97 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SLC25A25Q6KCM7 469 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 GPR180Q86V85 440 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 LCA5Q86VQ0 697 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SIAH3Q8IW03 269 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 CNPY4Q8N129 248 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 CYP4Z2PQ8N1L4 340 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 EIF1ADQ8N9N8 165 aaKnown RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 FAM98AQ8NCA5 519 aaKnown RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 MORN4Q8NDC4 146 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 C7orf57Q8NEG2 295 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 OR8K3Q8NH51 312 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SLC2A12Q8TD20 617 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ACMSDQ8TDX5 336 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
YBX3-206ENST00000536823 ATP6V1E2Q96A05 226 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 TMEM125Q96AQ2 219 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 FRG2BQ96QU4 278 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 SERPINI1Q99574 410 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 C1QTNF3Q9BXJ4 246 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
YBX3-206ENST00000536823 OR8D2Q9GZM6 311 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms